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. 2022 Dec 30;12(1):64. doi: 10.3390/pathogens12010064

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© 2022 by the authors.

Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).

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Antimicrobial-resistance-associated genes of strains from the panel for genomic characterization and for reference strains (n = 41 + 4). Strains were organized according to the cgMLST minimum distance tree. The figure lists serotype, sequence type, presence of a carbapenem resistance (imipenem and/or meropenem) phenotype, whether the strain was multidrug-resistant or not, and presence of decreased susceptibility to DDAC phenotype. The sub-variants of the aph(3′) gene were grouped, as well as the sub-variants of aac(6′). Co-occurrences of these sub-variants are indicated and separated by a backslash. The “-like genes” were variants not referenced on AMRFinder that had less than 100% shared identity. C: canine, B: bovine, DDAC: didecyldimethylammonium chloride, E: equine, F: feline, MDR: multidrug-resistant, O: serotype, ST: sequence type.