Table 3.
The top 10 up-regulated and down-regulated circRNAs in PBMCs from RA patients compared with OA patients.
| Probe name | p Value | FC | Chromosome | Spliced length | Best transcript | Gene symbol |
|---|---|---|---|---|---|---|
| Upregulated | ||||||
| hsa_circ_0098712_CBC1 | 0.02632323 | 6.8864860 | chr12 | 377 | ENST00000518444 | LARP4 |
| hsa_circ_0054223_CBC1 | 0.01925741 | 6.3721711 | chr2 | 958 | ENST00000505747 | THUMPD2 |
| hsa_circ_0000579_CBC1 | 0.002433971 | 6.2774995 | chr14 | 27943 | ENST00000390548 | IGHG1 |
| hsa-circRNA9292-4_CBC1 | 0.04470502 | 5.5602086 | chr10 | 216 | ENST00000369405 | ZDHHC6 |
| hsa_circ_0089902_CBC1 | 0.03785469 | 5.0789103 | chrX | 523 | ENST00000380550 | OFD1 |
| hsa-circRNA2298-2_CBC1 | 0.01088847 | 4.8317506 | chr14 | 407 | ENST00000335183 | CDKN3 |
| hsa_circ_0053881_CBC1 | 0.000231457 | 4.6143102 | chr2 | 1412 | ENST00000317907 | TTC27 |
| hsa-circRNA13773-35_CBC1 | 0.000920554 | 4.5989420 | chr3 | 3574 | ENST00000350721 | ATR |
| hsa_circ_0070964_CBC1 | 0.01993587 | 4.5115839 | chr4 | 259 | ENST00000281142 | SCLT1 |
| hsa_circ_0024203_CBC1 | 0.04652761 | 4.4826224 | chr11 | 5134 | ENST00000278616 | ATM |
| Downregulated | ||||||
| hsa_circ_0037720_CBC1 | 0.001051801 | 7.7784678 | chr16 | 1362 | ENST00000572232 | NMRAL1 |
| hsa_circ_0098003_CBC1 | 0.000209831 | 7.4740230 | chr12 | 5460 | ENST00000393736 | RERG |
| hsa_circ_0049678_CBC1 | 0.002946642 | 6.6635871 | chr19 | 1025 | ENST00000360228 | CACNA1A |
| hsa_circ_0030682_CBC1 | 0.00171535 | 6.3977960 | chr13 | 519 | ENST00000595437 | FARP1 |
| hsa_circ_0002557_CBC1 | 0.006829096 | 6.3660700 | chr13 | 194 | ENST00000595437 | FARP1 |
| hsa_circ_0125026_CBC1 | 0.003338279 | 5.6180599 | chr4 | 116 | ENST00000458497 | ALPK1 |
| hsa_circ_0034644_CBC1 | 0.002783396 | 5.4768980 | chr15 | 994 | ENST00000249749 | DLL4 |
| hsa_circ_0077567_CBC1 | 0.002641892 | 5.3373514 | chr6 | 1464 | ENST00000426155 | SNX3 |
| hsa_circ_0051704_CBC1 | 0.001385484 | 5.3119516 | chr19 | 880 | ENST00000509570 | SEPW1 |
| hsa_circ_0140790_CBC1 | 0.002040522 | 5.2572451 | chrY | 114 | ENST00000445253 | – |