Table 3.
Significantly enriched transporter system genes and carbohydrate-active enzymes in the transcriptome of Polaribacter dokdonensis MED152 in co-culture with M. commoda RCC299.
| Locus Tag | Protein ID | Fold Change | Description |
|---|---|---|---|
| CAZymes | |||
| MED152_03905 | WP_015480551.1 | 8.8 | glycosyltransferase family 2 protein (GT2) |
| MED152_05075 | WP_015480781.1 | 7.4 | amylo-(1,4 to 1,6) transglucosidase (GH13_8) |
| MED152_05110 | WP_015480788.1 | 4.7 | trehalase (GH37) |
| MED152_03915 | WP_015480553.1 | 18.5 | DUF4838 domain-containing protein (GH163) |
| MED152_03105 | WP_041383822.1 | 6 | response regulator (GT2) |
| PUL3 | |||
| MED152_05075 | WP_015480781.1 | 7.4 | amylo-(1,4 to 1,6) transglucosidase (GH13_8) |
| MED152_05080 | WP_041383396.1 | 5.7 | sugar kinase |
| MED152_05110 | WP_015480788.1 | 4.7 | trehalase (GH37) |
| PUL5 | |||
| MED152_08485 | WP_015481446.1 | 2.6 | glucosamine-6-phosphate deaminase |
| MED152_08490 | WP_015481447.1 | 3.2 | beta-N-acetylhexosaminidase (GH20, PUL5) |
| MED152_08495 | WP_015481448.1 | 4.5 | N-acetylglucosamine kinase |
All genes have an adjusted p value ≤ 0.01.
GH glycoside hydrolase, AA auxiliary activity, CE carbohydrate esterase, GT glycosyl transferases.