TABLE 1.
List of Faecalibacterium sp. strain information from this study
Strain | Illumina read count (paired) | PacBio reads N50 (bp) | No. of PacBio subreads | GC content (%) | No. of DNA CDSa | No. of rRNAs | No. of tRNAs | Coding ratio (%) | Length (bp) | Accession no. of: |
|||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BioSample | Genomes | Assembly | SRA | ||||||||||
IP-1-18 | 543,181 | 14,826 | 101,178 | 56.2 | 2,814 | 18 | 64 | 86.2 | 3,038,545 | SAMN26934697 | NZ_CP094472.1 | GCA_023347355.1 | SRX15120859, SRX15120845 |
IP-3-29 | 667,687 | 12,497 | 387,776 | 56.9 | 2,748 | 18 | 65 | 86.7 | 3,002,063 | SAMN26934698 | NZ_CP094471.1 | GCA_023347335.1 | SRX15120860, SRX15120846 |
I2-3-92 | 704,052 | 13,398 | 279,899 | 56.8 | 2,774 | 18 | 68 | 87.1 | 2,963,404 | SAMN26934699 | NZ_CP094470.1 | GCA_023347315.1 | SRX15120853, SRX15120847 |
HTF-F | 794,651 | 14,932 | 160,344 | 56.6 | 2,571 | 18 | 65 | 85.7 | 2,776,287 | SAMN26934700 | NZ_CP094473.1 | GCA_023347535.1 | SRX15120854, SRX15120848 |
I3-3-33 | 596,779 | 14,126 | 491,692 | 56.6 | 2,669 | 18 | 65 | 85.4 | 2,994,777 | SAMN26934701 | NZ_CP094469.1 | GCA_023347295.1 | SRX15120855, SRX15120849 |
I3-3-89 | 586,081 | 10,975 | 300,107 | 58 | 2,698 | 18 | 65 | 86 | 2,816,187 | SAMN26934702 | NZ_CP094468.1 | GCA_023347275.1 | SRX15120856, SRX15120850 |
I4-1-79 | 650,123 | 15,580 | 195,760 | 56 | 3,101 | 18 | 67 | 85.7 | 3,227,950 | SAMN26934703 | NZ_CP094467.1 | GCA_023347235.1 | SRX15120857, SRX15120851 |
I4-3-84 | 576,265 | 15,227 | 367,152 | 55.5 | 2,984 | 18 | 70 | 86.2 | 3,119,411 | SAMN26934704 | NZ_CP094466.1 | GCA_023347255.1 | SRX15120858, SRX15120852 |
CDS, coding DNA sequences.