Table 3.

KEGG analysis result of 22 enriched pathways

ID	Description	Gene Ratio	Bg Ratio	p.adjust	FDR	Rich Factor a
hsa04060	Cytokine-cytokine receptor interaction	34/155	295/8108	< 0.001	< 0.001	0.115
hsa04061	Viral protein interaction with cytokine and cytokine receptor	19/155	100/8108	< 0.001	< 0.001	0.190
hsa05340	Primary immunodeficiency	12/155	38/8108	< 0.001	< 0.001	0.316
hsa05332	Graft-versus-host disease	12/155	42/8108	< 0.001	< 0.001	0.286
hsa04659	Th17 cell differentiation	16/155	107/8108	< 0.001	< 0.001	0.149
hsa04612	Antigen processing and presentation	14/155	78/8108	< 0.001	< 0.001	0.179
hsa04650	Natural killer cell mediated cytotoxicity	16/155	131/8108	< 0.001	< 0.001	0.122
hsa04062	Chemokine signaling pathway	18/155	192/8108	< 0.001	< 0.001	0.094
hsa05321	Inflammatory bowel disease	11/155	65/8108	< 0.001	< 0.001	0.169
hsa04640	Hematopoietic cell lineage	12/155	99/8108	< 0.001	< 0.001	0.121
hsa04658	Th1 and Th2 cell differentiation	11/155	92/8108	< 0.001	< 0.001	0.119
hsa04514	Cell adhesion molecules	13/155	149/8108	< 0.001	< 0.001	0.087
hsa04660	T cell receptor signaling pathway	10/155	104/8108	< 0.001	< 0.001	0.096
hsa05235	PD-L1 expression and PD-1 checkpoint pathway in cancer	9/155	89/8108	< 0.001	< 0.001	0.101
hsa05320	Autoimmune thyroid disease	7/155	53/8108	< 0.001	< 0.001	0.132
hsa05330	Allograft rejection	6/155	38/8108	< 0.001	< 0.001	0.158
hsa04940	Type I diabetes mellitus	6/155	43/8108	0.002	0.001	0.139
hsa05323	Rheumatoid arthritis	8/155	93/8108	0.004	0.003	0.086
hsa05143	African trypanosomiasis	5/155	37/8108	0.006	0.006	0.135
hsa04672	Intestinal immune network for IgA production	5/155	49/8108	0.022	0.019	0.102
hsa04630	JAK-STAT signaling pathway	9/155	162/8108	0.034	0.030	0.056
hsa05416	Viral myocarditis	5/155	60/8108	0.049	0.043	0.083

^a Rich Factor = $\frac{countsofDEGsenrichedinonepathway}{countsofallthegenesrelatedinonepathway}$