Table 2.
Number of genes associated with the Bacillus subtilis K1 functional categories.
| GENE | Family HMM | Query ID |
|---|---|---|
| (Glycoside Hydrolases,GHs) | GH1.hmm | assembly_00394,00642, 04034 |
| GH3.hmm | assembly_00217 | |
| GH4.hmm | assembly_00782 | |
| GH13_31.hmm | assembly_00332, 03194, 03529 | |
| GH13_28.hmm | assembly_00353 | |
| GH13_29.hmm | assembly_00843 | |
| GH13_14.hmm | assembly_03029 | |
| GH13_9.hmm | assembly_03134 | |
| GH13_20.hmm | assembly_03535 | |
| GH18.hmm | assembly_00024, 03474, 01497, 00628 | |
| GH23.hmm | assembly_01236 | |
| GH26.hmm | assembly_00646, 02660 | |
| GH42.hmm | assembly_03485, 00777 | |
| GH43_11.hmm | assembly_01894 | |
| GH43_16.hmm | assembly_01961 | |
| GH43_5.hmm | assembly_02913 | |
| GH43_4.hmm | assembly_04041 | |
| GH51.hmm | assembly_02880, 02904 | |
| GH53.hmm | assembly_03484 | |
| GH65.hmm | assembly_03530 | |
| GH68.hmm | assembly_03517 | |
| GH73.hmm | assembly_03670, 03176 | |
| GH105.hmm | assembly_03047, 00769 | |
| GH126.hmm | assembly_00485 | |
| (Glycosyl Transferases,GTs) | GT1.hmm | assembly_00629, 01318, 02113 |
| GT2_Glyco_tranf_2_5.hmm | assembly_01882 | |
| GT2_Glyco_tranf_2_3.hmm | assembly_00488 | |
| GT2_Glycos_transf_2.hmm | assembly_00799, 00916, 01391, 01451, 01884, 01885, 02154, 03499, 03501, 03504, 03643, 03657, 03659, 03892, 03899 | |
| GT4.hmm | assembly_03667, 03647, 03505, 03503, 03127, 03124, 02502, 02243 | |
| GT8.hmm | assembly_03945 | |
| GT26.hmm | assembly_03667 | |
| GT28.hmm | assembly_01646, 02184 | |
| GT35.hmm | assembly_03130 | |
| GT46.hmm | assembly_00798 | |
| GT51.hmm | assembly_03849, 03499, 02228 | |
| GT83.hmm | assembly_01390 | |
| (Polysaccharide Lyases, PLs) | PL1_6.hmm | assembly_00820 |
| PL1_8.hmm | assembly_02017 | |
| PL3_1.hmm | assembly_03569 | |
| PL9_2.hmm | assembly_03744 | |
| PL11.hmm | assembly_00774, 00775 | |
| PL26.hmm | assembly_00778 | |
| (Carbohydrate Esterases, CEs) | CE1.hmm | assembly_00211, 01267, 03269 |
| CE4.hmm | assembly_00190, 00860, 01306, 01800 | |
| CE7.hmm | assembly_00367 | |
| CE9.hmm | assembly_03575 | |
| CE10.hmm | assembly_03291, 03511 | |
| CE12.hmm | assembly_04022, 00776 | |
| CE14.hmm | assembly_02118, 02244 | |
| (Auxiliary Activities, AAs) | AA7.hmm | assembly_00957, 03524 |
| AA6.hmm | assembly_00981 | |
| AA4.hmm | assembly_02899 | |
| (Carbohydrate-Binding Modules, CBMs) | CBM26.hmm | assembly_00353 |
| CBM3.hmm | assembly_01958 | |
| CBM6.hmm | assembly_01961 | |
| CBM63.hmm | assembly_02015 | |
| CBM66.hmm | assembly_02717 |