TABLE 1.
Oligonucleotide sequences of primers employed in RT-PCR analysis
Gene | Accession no. | Primer sequence and positionsa |
---|---|---|
b2 microglobulin | M17987 | 5′ 184-GAATTGCTATGTGTCTGGGT-203 |
3′ 2300-CATCTTCAAACCTCCATGATG-2289 | ||
IL-1β | M15840 | 5′ 4336-GACACATGGGATAACGAGGC-4356 |
3′ 5819-ACGCAGGACAGGTACAGATT-5800 | ||
IL-6 | M54894 | 5′ 52-TGAACTCCTTCTCCACAAGC-71 |
3′ 366-ATCCAGATTGGAAGCATCCA-347 | ||
IL-10 | U16720 | 5′ 5511-ACCAAGACCCAGACATCAAG-5530 |
3′ 7925-CAGGTACAATAAGGTTTCTCAAG-7947 | ||
IL-12 p40 | AF180563 | 5′ 16-CAGCAGTTGGTCATCTCTTG-35, |
3′ 435-CCAGCAGGTGAAACGTCCA-416 | ||
IL-16 | U82972 | 5′ 1683-ATGCCTGACCTCAACTCCTC-1703 |
3′ 2030-CTCCTGATGACAATCGTGAC-2011 | ||
TNF-α | Z15026 | 5′ 578-TGAGCACTGAAAGCATGATC-597 |
3′ 758-CCGCACCTCGACTCTCTATT-3739 | ||
TGF-β | M38449 | 5′ 301-GACAGGTTGGTAGCACGC-320 |
3′ 394-GGACACCAACTATTGCTTCAG-414 | ||
IFN-γ | J00219 | 5′ 508-TCTGCATCGTTTTGGGTTCT-518 |
3′ 2162-CAGCTTTTCGAAGTCATCTC-2142 | ||
ahpC | U18264 | 5′ 649-GCGATCAATTCCCCGCC-665 |
3′ 1036-AAGGTCACGCGGTCGGC-1020 | ||
35-kDa antigen | M69187 | 5′ 669-GCGCACCCACCAAGCGC-685 |
3′ 903-GACGCTCTGCTCGGCGG-887 | ||
MT10Sa | X60301 | 5′ 118-AGGGCCAGGTCGGTGGC-134 |
3′ 470-AGATCCGGACGATCGGC-454 | ||
Ag85B | X62398 | 5′ 141-GGTCGAGTACCTGCAGG-157 |
3′ 631-CGTCACCCATCGCGAGG-615 | ||
Ag85C | X57229 | 5′ 331-CCGCGTCGATGGGCCGC-347 |
3′ 680-CAGCGCGGAACCGCCCG-664 | ||
ESAT6 | X79652 | 5′ 24-GCAGTGGAATTTCGCGG-40 |
3′ 247-CTTCGCTGATCGTCCGC-231 | ||
rpoB | U12205 | 5′ 665-CTCCGTACCCGGAGCGC-681 |
3′ 1314-GCTCGCTGGTCCAGCCC-1298 | ||
invB | AF006054 | 5′ 1233-GGGGTGCCCTATTCGTGGGGT-1253 |
3′ 1460-GCCGCCGCCTGGGCCGTAAAA-1439 | ||
sigF | U41061 | 5′ 171-GTTTGCCTGCCGGCTCACCGG-191 |
3′ 715-CAACGGACGAAGCACCTCCCG-695 | ||
umaA2 | U27357 | 5′ 11417-GTCGCAATGACTGGACCGCGG-11437 |
3′ 11930-AAGCTGAACCTCGAACCCGGG-11909 | ||
eisb | AF144099 | 5′ -GGATCCGTCAGACCCACCGAGCAT- |
3′ -CGGATCCCCATCCATGGCGTGT- |
Each primer sequence is indicated in its 5′-3′ direction.
Modified from Wei et al. (37).