Table 5.

Summary of transcript assembly between different transcriptome samples

Sample A & Sample B	A\B	A∩B	B\A
D. melanogaster(Head) RNase R WT19: Rep1 & Rep2	311	3017	298
D. melanogaster(Head) RNase R WT28: Rep1 & Rep2	199	2343	196
D. melanogaster(Head) RNase R: WT19 & WT28	1889	1737	1001
PA1 cell line: PolyA(–) & PolyA(–)/RNase R	1003	6075	761

Pair-wise set difference and set overlaps between samples. Column 1 provides information on the two samples in the pair-wise comparison of reconstructed transcripts, columns 2 and 4 specify information about the number of different transcripts between samples and column 3 contains the number of overlapping transcripts.