Table 2.

The comparison of performance on the first CAFA3 challenge dataset

Method	F  max			S  min			AUPR
	MFO	BPO	CCO	MFO	BPO	CCO	MFO	BPO	CCO
Naive	0.290	0.357	0.562	10.733	25.028	8.465	0.130	0.254	0.456
DiamondBLAST	0.431	0.399	0.506	10.233	25.320	8.800	0.178	0.116	0.142
DiamondScore	0.509	0.427	0.557	9.031	22.860	8.198	0.340	0.267	0.335
DeepGO	0.393	0.435	0.565	9.635	24.181	9.199	0.303	0.385	0.579
DeepGOCNN	0.420	0.378	0.607	9.711	24.234	8.153	0.355	0.323	0.616
DeepGOPlus	0.544	0.469	0.623	8.724	22.573	7.823	0.487	0.404	0.627

Best performance in bold. F_max and AUPR, highest; S_min, lowest.