Table 4.

The AMR genes annotated in this genome and corresponding AMR mechanism

Genes	ABR mechanism
katG	Antibiotic activation enzyme
PLA family	Antibiotic inactivation enzyme
marA, marB, marR	Antibiotic resistance gene cluster or operon
alr, ddl, dxr, EF-G, EF-Tu, folA, Dfr, folP, gyrA, gyrB, inhA, fabI, Iso-tRNA, kasA, MurA, rho, rpoB, rpoC, S10p, S12p	Antibiotic target in susceptible species
bcrC	Antibiotic target protection protein
acrAB-TolC, acrAD-TolC, acrZ, emrAB-TolC, emrD, macA, macB, mdfA/Cmr, mdtABC-TolC, mdtL, sugE, tolC/OpmH	Efflux pump conferring antibiotic resistance
gdpD, pgsA	Protein altering cell wall charge conferring antibiotic resistance
oprB	Protein modulating permeability to antibiotic
acrAB-TolC, emrAB-TolC, H-NS, oxyR	Regulator modulating expression of antibiotic resistance genes