Skip to main content
. Author manuscript; available in PMC: 2023 Sep 1.
Published in final edited form as: Curr Protoc. 2022 Sep;2(9):e539. doi: 10.1002/cpz1.539

Table 3.

K-CLIP reaction conditions for p53 and subsequent Western blot analysis *

Negative Control #1 Negative Control #2 Crosslinking Reaction
HEK293 lysate (500 μg) 13.5 μL 13.5 μL 13.5 μL
Kinase Buffer (1X) 4 μL 4 μL 4 μL
ATP (5 mM) 4 μL - -
ATP-arylazide (5 mM) - 4 μL 4 μL
Water 18.5 μL 18.5 μL 18.5 μL
UV + - +
*

For Basic Protocol 2, the stock concentrations are 37 mg/mL HEK293 lysate, 50 mM ATP-arylazide, and 50 mM ATP. The HEK293 lysate contains kinases and the p53 substrate endogenously.