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. Author manuscript; available in PMC: 2023 Jan 31.
Published in final edited form as: Chem Res Toxicol. 2020 Dec 21;34(2):495–506. doi: 10.1021/acs.chemrestox.0c00322

Table 6:

The performance comparison between w/o Property Augmentation (DILI) and w/ Property Augmentation (Tox-DILI) using cross-validation with random splitting. Higher score within each pair-wise comparison is marked as bold.

MPNN (DILI) MPNN (Tox-DILI) DMPNN (DILI) DMPNN (Tox-DILI) MV-GNNcross(DILI) MV-GNNcross(Tox-DILI)
Accuracy 0.738±0.094 0.788 ±0.044 0.750±0.098 0.785 ±0.024 0.788±0.077 0.814 ±0.047
Sensitivity 0.727±0.133 0.761 ±0.072 0.728±0.135 0.748 ±0.091 0.762±0.105 0.768 ±0.100
Specificity 0.752±0.129 0.807 ±0.070 0.764±0.172 0.812 ±0.045 0.809±0.092 0.849 ±0.097
F1-score 0.666±0.124 0.728 ±0.045 0.764 ±0.172 0.718±0.045 0.721±0.105 0.753 ±0.063
MCC 0.473±0.202 0.562 ±0.082 0.499±0.179 0.553 ±0.060 0.562±0.178 0.621 ±0.114