Table 2.
Identification of 29 antimicrobial potential Actinobacteria and 5 inactive strains∗ based on 16S rRNA gene sequences.
| Strain No. | Site | NCBI GenBank accession number | GenBank closest known Species (accession number) | Similarity (%) | Identification |
|---|---|---|---|---|---|
| AS2 | Ahouli | OP122091 |
Streptomyces microflavus (EU570699) Streptomyces sp. (KX950877) |
99.93 | Streptomyces sp. |
|
| |||||
| AS3 | Ahouli | OP122569 |
Streptomyces africanus (MT355846) Streptomyces sp. (MG930085) |
99.72 99.44 |
Streptomyces sp. |
|
| |||||
| AS16 | Ahouli | OP117486 |
Lentzea jiangxiensis (NR_108456) Lentzea sp. (EU722750) |
99.93 99.00 |
Lentzea sp. |
|
| |||||
| AS20∗ | Ahouli | OP122985 |
Streptomyces lienomycini (KF991646) Streptomyces thinghirensis (NR_116901) |
99.93 | Streptomyces sp. |
|
| |||||
| AS22 | Ahouli | OP124048 |
Streptomyces sp. (KT183568) Streptomyces pratensis (KM186629) |
100 | Streptomyces sp. |
|
| |||||
| AS28 | Ahouli | OP125353 |
Streptomyces sp. (MN826253) Streptomyces albidoflavus (MF663704) |
99.79 | Streptomyces sp. |
|
| |||||
| AS30 | Ahouli | OP125546 |
Streptomyces sp. (MT450476) Streptomyces luridiscabiei (MH241016) |
100 | Streptomyces sp. |
|
| |||||
| AS34 | Ahouli | OP125838 |
Streptomyces lienomycini (KF991646) Streptomyces thinghirensis (NR_116901) |
100 | Streptomyces sp. |
|
| |||||
| AS45 | Ahouli | OP164531 |
Streptomyces sp. (MT012002) Streptomyces violascens (MG190789) |
100 | Streptomyces sp. |
|
| |||||
| AS52 | Ahouli | OP142749 |
Streptomyces sp. (MT450476) Streptomyces luridiscabiei (MH241016) |
100 | Streptomyces sp. |
|
| |||||
| BS54 | Mibladen | OP164533 |
Streptomyces mediolani (OM980220) Streptomyces anulatus (AB184199) |
99.85 99.64 |
Streptomyces sp. |
|
| |||||
| BS56∗ | Mibladen | OP131863 |
Streptomyces venezuelae (CP029197) Streptomyces sp. (KF772617) |
99.71 | Streptomyces sp. |
|
| |||||
| BS57 | Mibladen | OP131937 |
Streptomyces caelestis (NR_112512) Streptomyces sp. HQ385920 |
99.86 99.65 |
Streptomyces sp. |
|
| |||||
| BS58 | Mibladen | OP132226 |
Streptomyces sp. (MT450476) Streptomyces flavofriseus (MT355868) |
100 | Streptomyces sp. |
|
| |||||
| BS59 | Mibladen | OP132389 |
Streptomyces sp. (MK628999) Streptomyces pratensis (MH482882) |
100 | Streptomyces sp. |
|
| |||||
| BS60 | Mibladen | OP132959 |
Streptomyces sp. (MT450476) Streptomyces pratensis (KU870789) |
100 | Streptomyces sp. |
|
| |||||
| BS61 | Mibladen | OP136535 |
Streptomyces sp. (MN187461) Streptomyces narbonensis (NR_112282) |
100 99.50 |
Streptomyces sp. |
|
| |||||
| BS68 | Mibladen | OP133137 |
Streptomyces sp. (MT176505) Streptomyces hydrogenans (MG195144) |
100 | Streptomyces sp. |
|
| |||||
| BS69 | Mibladen | OP133217 |
Streptomyces sp. (MT176505) Streptomyces koyangensis (MG188671) |
100 | Streptomyces sp. |
|
| |||||
| CS86∗ | Midelt | OP164536 |
Streptomyces daliensis (NR_115323) Streptomyces cellulosae (KP170478) |
99.28 98.78 |
Streptomyces sp. |
|
| |||||
| DS93 | Zaida | OP133364 |
Streptomyces sp (KC414008) Streptomyces cavourensis (CP030930) |
99.93 99.78 |
Streptomyces sp. |
|
| |||||
| DS102 | Zaida | OP164544 |
Streptomyces sp. (KF772617) Streptomyces venezuelae (NR_112510) |
99.51 99.44 |
Streptomyces sp. |
|
| |||||
| DS103 | Zaida | OP133386 |
Streptomyces sp. (MT176505) Streptomyces violascens (MN704434) |
100 | Streptomyces sp. |
|
| |||||
| DS104 | Zaida | OP133558 |
Streptomyces sp. (MN826253) Streptomyces albidoflavus (MF663704) |
100 | Streptomyces sp. |
|
| |||||
| DS105 | Zaida | OP164568 |
Streptomyces sp. (MG893105) Streptomyces lividans (KU291358) |
99.86 | Streptomyces sp. |
|
| |||||
| DS106 | Zaida | OP164552 |
Streptomyces sp. (MT176505) Streptomyces albidoflavus (MH021968) |
99.91 | Streptomyces sp. |
|
| |||||
| DS107 | Zaida | OP142747 |
Streptomyces sp. (MT176505) Streptomyces hydrogenans (MG195144) |
100 | Streptomyces sp. |
| DS109 | Zaida | OP164558 |
Streptomyces sp. (MT176505) Streptomyces koyangensis (MG188671) |
100 | Streptomyces sp. |
|
| |||||
| CS138 | Midelt | OP164541 |
Streptomyces sp. (KJ777675) Streptomyces coelicolor (KF742497) |
99.43 | Streptomyces sp. |
|
| |||||
| CS143 | Midelt | OP135549 |
Streptomyces sp. (MK608363) Streptomyces spinoverrucosus (EU593714) |
100 99.71 |
Streptomyces sp. |
|
| |||||
| DS155 | Zaida | OP135958 |
Streptomyces candidus (MT760586) Streptomyces candidus (NR_112302) |
99.92 | Streptomyces sp. |
|
| |||||
| DS167 | Zaida | OP137212 |
Streptomyces candidus (NR_112302) Streptomyces candidus (NR_043504) |
99.78 99.71 |
Streptomyces sp. |
|
| |||||
| DS169 | Zaida | OP136968 |
Streptomyces sp. (OL636374) Streptomyces candidus (JQ422145) |
99.92 | Streptomyces sp. |
|
| |||||
| DS182∗ | Zaida | OP164546 |
Amycolatopsis marina (ON810423) Amycolatopsis palatopharyngis (ON810441) |
99.30 | Amycolatopsis sp. |
|
| |||||
| DS189∗ | Zaida | OP141210 |
Lentzea californiensis (LC214996) Lentzea violacea (KF318391) |
99.78 | Lentzea sp. |
∗Strains without antimicrobial activity.