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. 2023 Jan 18;614(7946):125–135. doi: 10.1038/s41586-022-05620-1

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© The Author(s) 2023

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 6 — SGB phenotypes were inferred using Traitar⁶⁰ (Methods). Association between SGB transmissibility and predicted phenotypes was assessed with Wilcoxon rank-sum two-sided tests on the 25% of SGBs displaying the highest transmissibility and compared with the 25% of SGBs displaying the lowest transmissibility for each transmission mode and environment. Colours represent the Wilcoxon r statistics; significant P_adj values are shown in black (P_adj < 0.05) and in grey otherwise.