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. 2023 Jan 20;13:1092028. doi: 10.3389/fimmu.2022.1092028

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Copyright © 2023 Heimli, Flåm, Hjorthaug, Trinh, Frisk, Dumont, Ribarska, Tekpli, Saare and Lie

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Reanalysis of thymocyte subset. (A) UMAP of thymocyte subset. (B, D) Pseudotime analysis by Monocle3. (C, E) Expression of selected genes in thymocyte subset. The agonist.set.score reflects the mean expression of NR4A1, NR4A3, NFKBID, NFATC1, BCL2L11 and PDCD1. (F) Expression of selected genes in thymocyte subset along pseudotime. Colouring according to annotations in (A).