Table 3.

PCR-RFLP genotyping of T. gondii isolates from cat-hunted wild small mammals.

Rodent ID	Host species	Group/Location	Tissue	PCR-RFLP allele markers												RFLP-ToxoDB genotype
				SAG1	3′-SAG2	5′-SAG2	Alt.SAG2	SAG3	BTUB	GRA6	C22-8	C29-2	L358	PK1	Apico
36	Arvicola amphibius	Group 1/Finstersee, Zug	Brain	II/III	II	I/II	II	II	II	II	II	II	II	x	I	x
55	Myodes glareolus	Group 1/Finstersee, Zug	Brain	II/III	II	I/II	II	II	II	II	II	II	II	II	I	#3
4	Apodemus flavicollis	Group 1/Finstersee, Zug	Brain	II/III	II	I/II	II	x	II	I	x	x	II	II	I	x
B42	Arvicola amphibius	Group 3/Oey, Bern	Brain	II/III	II	I/II	II	II	II	II	II	II	II	II	I	#3
B44	Arvicola amphibius	Group 3/Oey, Bern	Masseter muscle	II/III	II	I/II	II	II	II	II	II	II	II	II	I	#3

Note: GenBank accession numbers of the marker sequences obtained in this study: 3′SAG2:OQ102531-102535; Apico: OQ102536-102540; BTUB: OQ102541-102545; c22-8:OQ102546-102549; c29-2: OQ102550-102553; L358: OQ102554-102558

x: not amplified