TABLE 4.
Nod factors and their baroque decorationsa
A. caulinodans ORS571 | C18:1, C16:0 | Me | OH | Cb, H | Fuc, H | Ara, H | OH | 1, 2 | 172 |
B. elkanii USDA61 | C18:1 | Me, H | Cb, H | Ac, H | MeFuc | H | OH | 1, 2 | 35 |
B. japonicum USDA110 | C16:0, C16:1, C18:1 | H | OH | H | MeFuc | H | OH | 2 | 229 |
Rhizobium sp. strain GRH2 | C16:0, C18:0, C18:1, C20:1 | Me, H | OH | H | S, H | H | OH | 1, 2, 3 | 160 |
Rhizobium sp. strain ORS1645 | C18:0, C18:1 | Me | Cbc | Cbc | S, H | H | OH | 2 | 164 |
Rhizobium sp. strain NGR234 | C16:1, C18:0, C18:1 | Me | Cb, OH | Cb, H | MeFuc, AcMeFuc, SMeFuc | H | OH | 2 | 206 |
R. etli CFN42 | C18:1 | Me | Cb, OH | H | AcFuc | H | OH | 2 | 33 |
R. etli CE3 | C18:0, C18:1 | Me | Cb, OH | H | AcFuc | H | OH | 2 | 203 |
R. fredii USDA191b | C18:1, C18:0, C16:1 | H | H | H | Fuc, MeFuc | H | H | 0, 1, 2 | 7 |
R. fredii USDA257 | C18:1 | H | OH | H | Fuc, MeFuc | H | OH | 0, 1, 2 | 6 |
R. galegae | C18:1, C18:2, C18:3, C20:2, C20:3 | H | OH | Cb | H | H | Ac | 1 | 282 |
R. huakuiid | C18:4 | H | OH | H | S | H | OH | 2 | 282 |
R. leguminosarum | |||||||||
bv. trifolii ANU843 | C16:0, C16:1, C18:0, C18:1, C18:2, C20:3 | H | OH | H, Ac | H | H | OH | 0, 1, 2 | 188 |
bv. trifolii LPR5045 | C18:0, C18:1, C20:3, C20:4 | H | OH | Ac | H | H | OH | 2 | 269b |
bv. viciae RBL5560 | C18:1, C18:4 | H | OH | Ac | H | H | OH | 1, 2 | 252 |
bv. viciae TOM | C18:1, C18:4 | H | OH | Ac | Ac | H | OH | 1, 2 | 80 |
R. loti NZP2213 | C16:0, C16:1, C18:0, C18:1, C20:0, C20:1, C22:1 | H | Cb | H | Fuc, AcFuc | H | Fuc | −1, 0, 1, 2 | 187 |
R. loti NZP2037 | C18:0, C18:1 | Me | Cb | Cb | AcFuc | H | OH | 2 | 161 |
R. meliloti RCR2011 | C16:1, C16:2, C16:3 | H | OH | H, Ac | S | H | OH | 1, 2 | 2, 154 |
R. tropici CFN299 | C18:1 | Me | OH | H | S, H | H | OH | 2 | 202 |
S. saheli ORS611 | C16:0, C18:1 | Me | Cbc | Cbc | Fuc, H | Ara, H | OH | 2 | 163 |
S. teranga bv. acaciae ORS1602 | C16:0, C18:0, C18:1 | Me | Cbc | Cbc | S, H | H | OH | 2 | 164 |
Abbreviations: Ac, acetyl; Ara, arabinosyl; Cb, carbamoyl; Fuc, fucosyl; H, hydrogen; Me, methyl; S, sulfate; MeFuc, methylfucose; AcMeFuc, acetylated methylfucose; SMeFuc, sulfated methylfucose.
In USDA191, a minor fraction of the N-acetylglucosamine marked in brown is replaced by a glucose.
Carbamoyl group is either on R2 or R3.
R. huakuii Nod factors are partially glycolylated at the C-2 position of the reducing terminus.