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. 2023 Feb 2;11:e14810. doi: 10.7717/peerj.14810

Table 2. The CO1 and 12S primers used and designed for the target species of interest.

Target species Gene Primer name Tm (°C) Sequence 5′–3′ Reference
Metazoan diversity CO1 F: mlCOIintF, R: jgHCO2198 51.2 46.4 GGWACWGGWTGAACWGTWTAYCCYCC TAIACYTCIGGRTGICCRAARAAYCA Leray et al. (2013)
Red hind CO1 Epine_gutt_For, Epine_gutt_Rev 57.6 57.4 ACCCGCATGGGCTAGATTTC TTCGTCTGGAGTTGAAGCCG Made with Primer Blast
Nassau grouper CO1 Epi_str_For, Epi_str_Rev 58.4 56.4 GCTGGACGGTATATCCCCCT GATACTGGGAGATTGCGGGA Made with Primer Blast
Mutton snapper CO1 Lut_ana_For, Lut_ana_Rev 56.4 58.5 CGCTATTCGTTTGAGCCGTC AGATGGCAGGGGGCTTCATA Made with Primer Blast
Subtropical marine fishes 12S MiFish-U Forward MiFish-U Reverse 56.6 56.5 GTCGGTAAAACTCGTGCCAGC GTATCACCCCATAGATTAGGGTCAAAC Miya et al. (2015)
Red hind 12S RH-F 12S, RH-R 12S 53.8 52.7 GGAACGCTCTGCTTTCTG GGCTACATTCCCTGTCAC GenBank: AY949437
Nassau grouper 12S NS-F 12S, NS-R 12S 57.6 56.6 TCTAAAGCACCGCCAAGTCC ACACAATAACTATCCGCCTGGAG GenBank: AY949433
Yellowfin grouper 12S YF-F 12S, YF-R 12S 51.2 53.2 GTAATAGGGAATGTAGCCCA GGCCCTTCAGTAAGCAC GenBank: AY949419
Mutton snapper 12S MT-F 12S, MT-R 12S 56.3 56.2 CGCCTATATACCACCGTCGT TCCATACGCTACACCTCGAC GenBank: EF095569