Table 2. The CO1 and 12S primers used and designed for the target species of interest.
| Target species | Gene | Primer name | Tm (°C) | Sequence 5′–3′ | Reference |
|---|---|---|---|---|---|
| Metazoan diversity | CO1 | F: mlCOIintF, R: jgHCO2198 | 51.2 46.4 | GGWACWGGWTGAACWGTWTAYCCYCC TAIACYTCIGGRTGICCRAARAAYCA | Leray et al. (2013) |
| Red hind | CO1 | Epine_gutt_For, Epine_gutt_Rev | 57.6 57.4 | ACCCGCATGGGCTAGATTTC TTCGTCTGGAGTTGAAGCCG | Made with Primer Blast |
| Nassau grouper | CO1 | Epi_str_For, Epi_str_Rev | 58.4 56.4 | GCTGGACGGTATATCCCCCT GATACTGGGAGATTGCGGGA | Made with Primer Blast |
| Mutton snapper | CO1 | Lut_ana_For, Lut_ana_Rev | 56.4 58.5 | CGCTATTCGTTTGAGCCGTC AGATGGCAGGGGGCTTCATA | Made with Primer Blast |
| Subtropical marine fishes | 12S | MiFish-U Forward MiFish-U Reverse | 56.6 56.5 | GTCGGTAAAACTCGTGCCAGC GTATCACCCCATAGATTAGGGTCAAAC | Miya et al. (2015) |
| Red hind | 12S | RH-F 12S, RH-R 12S | 53.8 52.7 | GGAACGCTCTGCTTTCTG GGCTACATTCCCTGTCAC | GenBank: AY949437 |
| Nassau grouper | 12S | NS-F 12S, NS-R 12S | 57.6 56.6 | TCTAAAGCACCGCCAAGTCC ACACAATAACTATCCGCCTGGAG | GenBank: AY949433 |
| Yellowfin grouper | 12S | YF-F 12S, YF-R 12S | 51.2 53.2 | GTAATAGGGAATGTAGCCCA GGCCCTTCAGTAAGCAC | GenBank: AY949419 |
| Mutton snapper | 12S | MT-F 12S, MT-R 12S | 56.3 56.2 | CGCCTATATACCACCGTCGT TCCATACGCTACACCTCGAC | GenBank: EF095569 |