Table 1.
Initial hypothesized function of Populus lysin motif receptor-like kinases (LysM-RLKs) based on phylogenetic relatedness with functionally characterized LysM-RLKs from other plant species.
| Poplar LysM-RLK | Phylogenetic Analysis | ||
|---|---|---|---|
| Gene ID | Protein name | Closest homolog(s) | Hypothesized function |
| Potri.002G226600 | PtCERK1-like1 | MtLYK9 | CO perception, dual role in immune and symbiotic signaling[25] |
| Potri.014G156400 | PtCERK1-like2 | MtLYK9 | CO perception, dual role in immune and symbiotic signaling[25] |
| Potri.011G010000 | PtCERK1-like3 | MtLYK9 | CO perception, dual role in immune and symbiotic signaling[25] |
| Potri.001G332800 | PtLYK2-like1 | AtLYK2 | CO perception, elicitor‐induced resistance to pathogens[108] |
| Potri.T115100 | PtLYK-like2 | AtLYK2 | CO perception, elicitor‐induced resistance to pathogens[108] |
| Potri.001G190200 | PtLYK3-like | AtLYK3 | LCO-induced suppression of the innate immune response[71] |
| Potri.007G032100 | PtLYK4-like1 | AtLYK4, MtLYR3 | AtLYK4: CO perception[22]; MtLYR3: LCO perception[59] |
| Potri.005G128200 | PtLYK4-like2 | AtLYK4, MtLYR3 | AtLYK4: CO perception[22]; MtLYR3: LCO perception[59] |
| Potri.005G259600 | PtLYK5-like1 | AtLYK5 | CO perception, interacts with CERK1 during immune signaling[21] |
| Potri.002G001600 | PtLYK5-like2 | AtLYK5 | CO perception, interacts with CERK1 during immune signaling[21] |
| Potri.005G128400 | PtNFP-like1 | MtNFP | LCO perception, direct role in symbiotic signaling[33], [53] |
| Potri.007G032300 | PtNFP-like2 | MtNFP | LCO perception, direct role in symbiotic signaling[33], [53] |