TABLE 5.
Amino acid residues around (putative) SPase II cleavage sitesa
Position and residue |
Frequency (% of total) |
---|---|
−3 | |
L | 65 |
V | 8 |
F | 7 |
T | 6 |
I | 5 |
M | 2 |
G | 2 |
S | <1 |
W | <1 |
−2 | |
A | 36 |
S | 24 |
T | 11 |
I | 6 |
V | 6 |
G | 6 |
M | 2 |
L | 2 |
C | 2 |
P | 2 |
F | 2 |
L | 2 |
D | <1 |
N | <1 |
−1 | |
A | 39 |
G | 35 |
L | 8 |
I | 4 |
S | 4 |
V | 2 |
T | 2 |
F | 2 |
P | 2 |
M | <1 |
C | <1 |
E | <1 |
+1 | |
C | 100 |
+2 | |
G | 30 |
S | 28 |
A | 9 |
I | 4 |
T | 4 |
F | 4 |
W | 4 |
K | 4 |
L | 4 |
The frequency of a particular amino acid at each position is given as the percentage of the total number of predicted lipoprotein signal peptides in which it appears.