Table 2. Coverage of examined pfcyp19b locus in TRACI and TRACII studies.
Study | TRACII AmpliSeq | TRACI genome | TRACII genome |
---|---|---|---|
No of samples | 144 | 461 | 365 |
Target mean coverage | 2731.88 | 71.71 | 108.88 |
Target median coverage | 2784.98 | 65.89 | 116.17 |
Coverage SD | 644.42 | 28.52 | 62.27 |
Range of coverage | 45.6–4127.9 | 6.9–213.5 | 0.3–375.1 |
Average coverage for 18.7 Kb long pfcyp19b amplicon and the coverage of the same fragment extracted from TRACI WGS and TRACII WGS data. Numbers indicate number of reads on average covering the analyzed locus in each respective dataset.