Table 1. Summary of Standards, Reporting Requirements Documents and Controlled Vocabularies Released and under Development within PSIa.
| Working Groups | Guidelines | v. | Formats | v. | Controlled Vocabularies | v. |
|---|---|---|---|---|---|---|
| Molecular Interactions | MIMIx | 1.1.2 | PSI-MI XML | 2.5.4 | PSI-MI CV | 2.5.0 |
| MIABE | 1.0.0 | PSI-MI XML | 3.0.0 | |||
| MIAPAR | 1.0.0 | MITAB | 2.7, 2.8 | |||
| Mass Spectrometry | Mass spectrometry (MIAPE-MS) | 2.98 | mzML | 1.1.0 | PSI-MS | 4.0.15 |
| TraML | 1.0.0 | XLMOD | 1.1.0 | |||
| Proteomics Informatics | Identification (MIAPE-MSI) | 1.1 | mzIdentML | 1.2.0 | ||
| Mass spectrometry Quantification (MIAPE-Quant) | 1.0 | mzQuantML | 1.0.1 | |||
| mzTab | 1.0.0 | |||||
| mzTab-M | 2.0.0 | |||||
| proBed | 1.0.0 | |||||
| proBAM | 1.0.0 | |||||
| PEFF | 1.0.0 | |||||
| USI | 1.0.0 | |||||
| ProXI (under development) | ||||||
| ProForma | 2.0 | |||||
| mzSpecLib (under development) | ||||||
| Quality Control | mzQC (PSI spec. under development) | |||||
| Protein Modifications | PSI-MOD | 1.031.6 | ||||
| Intrinsically Disordered Proteins | MIADE (under development) |
a
Links to documentation about each standard can be obtained from https://www.psidev.info/.