Table 1.
Collection details and GenBank accession numbers of isolates treated in this study, and associated ex-type strains where available. Species for which additional sequences were generated during the course of this study are also listed here. Novel GenBank accession numbers are indicated in bold font.
| Species | Culture or voucher accession number(s)1 | Locality | Substrate | Collector(s) |
GenBank accession number2
|
||||
|---|---|---|---|---|---|---|---|---|---|
| ITS | LSU | rpb2 | tub2 | Other loci | |||||
| Annellophorella ellisii | CBS 738.70 = IMI 140024, ex-type | France | Wood scrap on forest soil | – | ON811482.1 | MH871721.1 | – | – | – |
| Ascochyta nigripycnidia | CBS 116.96 = CCMF 243 = PD 95/7930, ex-type | Czech Republic | Vicia cracca, leaf spot | M. Ondrej | NR_135978.1 | NG_070603.1 | MT018253.1 | GU237637.1 | – |
| CPC 39716 = CBS 148249 | Russia | Vicia tenuifolia | T.S. Bulgakov | ON811483.1 | ON811542.1 | ON803534.1 | – | tef1 (first part): ON803560.1 | |
| Ascocorticium sorbicola, gen. et sp. nov. | CPC 40075 = CBS 148303, ex-type | Belgium | Sorbus aucuparia, leaves | B. Declercq | ON811506.1 | ON811565.1 | ON803545.1 | – | tef1 (second part): ON803584.1 |
| Camarographium stephensii | CPC 41598 = CBS 149168, ex-neotype | Netherlands | Pteridium aquilinum, dead leaf fronds | P.W. Crous | ON811484.1 | ON811543.1 | – | ON803587.1 | tef1 (first part): ON803561.1 |
| CPC 41923 | Netherlands | Pteridium aquilinum, stem | P.W. Crous | ON811485.1 | ON811544.1 | – | ON803588.1 | tef1 (first part): ON803562.1 | |
| Cercosporidium chaetomium | CPC 18624 = CBS 142177, ex-epitype | Canada | Euphorbia sp. | P.W. Crous & K. Seifert | NR_156367.1 | NG_069527.1 | MF951474.1 | – | – |
| CPC 39688 = CBS 148457 | Russia | Polygonum aviculare | T.S. Bulgakov | ON811486.1 | ON811545.1 | ON803535.1 | – | – | |
| Coniella eucalyptorum | CPC 3904 = CBS 112640 = DFR 100185, ex-type | Australia | Eucalyptus grandis x tereticornis | P.Q. Thu & R.J. Gibbs | AY339338.1 | AY339290.1 | KX833452.1 | – | tef1 (first part): KX833637.1 |
| CPC 39780 = CBS 149182 | South Africa | Eucalyptus benthamii, leaves | J. Roux | ON811487.1 | ON811546.1 | – | ON803589.1 | tef1 (first part): ON803563.1 | |
| Curvularia eragrostidicola | BRIP 12538, ex-type | Australia | Eragrostis pilosa, inflorescence | J.L. Alcorn | NR_158446.1 | – | – | – | gapdh: MH433643.1, tef1 (first part): MH433661.1 |
| CPC 39009 = CBS 147069 | Namibia | Dung of Procavia sp. | P.W. Crous | ON811488.1 | ON811547.1 | ON803536.1 | – | tef1 (second part): ON803581.1 | |
| Dactylaria retrophylli, sp. nov | CPC 39510 = CBS 148271, ex-type | Colombia | Retrophyllum rospigliosii | M.J. Wingfield | ON811489.1 | ON811548.1 | – | – | – |
| Dactylellina miltoniae, sp. nov. | CPC 39508 = CBS 148270, ex-type | Colombia | Miltonia clowesii, twigs | M.J. Wingfield | ON811490.1 | ON811549.1 | ON803537.1 | – | tef1 (second part): ON803582.1 |
| Dothiora viticola, comb. nov. | CBS 140676 = FMR 13040 = L9D-17, ex-type | Spain: Canary Islands | Vitis vinifera cv. Malvasia, fruit (grapes) | F. Laich | NR_137620.1 | MH878164.1 | – | – | – |
| Elsinoe corni | CPC 41728 = CBS 148184, ex-epitype | USA: North Carolina | Cornus florida | A. Loyd | ON811491.1 | ON811550.1 | ON803538.1 | – | – |
| Elsinoe parthenocissi | CPC 38770 = T19_06384B = CBS 146969 | New Zealand | Parthenocissus quinquefolia | C. Inglis | ON811492.1 | ON811551.1 | ON803539.1 | – | – |
| Exophiala eucalyptigena, sp. nov. | CPC 41024 = CBS 148273, ex-type | Australia | Dead leaves of Eucalyptus viminalis subsp. viminalis supporting Idolothrips spectrum population | A. Wells & L.A. Mound | ON811493.1 | ON811552.1 | – | ON803590.1 | tef1 (first part): ON803564.1 |
| Floricola juncicola | CPC 38197 = CBS 146811, ex-type | France | Juncus sp., dead culm | A. Gardiennet | NR_173010.1 | NG_076710.1 | MW890063.1 | – | tef1 (first / second part): MW890092.1 / MW890108.1 |
| CPC 41356 = CBS 148318 | Netherlands | Juncus effusus, dead culm | E.R. Osieck | ON811494.1 | ON811553.1 | ON803540.1 | – | tef1 (first part): ON803565.1 | |
| CPC 41357 = CBS 148287 | Netherlands | Juncus effusus, dead culm | E.R. Osieck | ON811495.1 | ON811554.1 | ON803541.1 | – | tef1 (first part): ON803566.1 | |
| Floricola sulcata, comb. nov. | CBS 118224 = CMW 18063, ex-type | South Africa | Ischyrolepis subverticellata, dead culm | S. Marincowitz | JX517284.1 | JX517293.1 | – | – | – |
| CPC 41345 = CBS 148286 | Netherlands | Juncus effusus, dead culm | E.R. Osieck | ON811496.1 | ON811555.1 | ON803542.1 | – | tef1 (first part): ON803567.1 | |
| Idriellomyces syzygii, sp. nov. | CPC 40065 = CBS 148252, ex-type | South Africa | Syzygium cordatum, leaves | M.J. Wingfield | ON811497.1 | ON811556.1 | – | – | – |
| Leptopeltis litigiosa | CPC 41927 = CBS 149171, ex-epitype | Netherlands | Pteridium aquilinum, dead leaf fronds | P.W. Crous | ON811498.1 | ON811557.1 | – | – | – |
| Macgarvieomyces juncicola | CPC 40815 = CBS 148264 | Netherlands | Juncus effusus, dead culm | E.R. Osieck | ON811499.1 | ON811558.1 | – | – | actA: ON803512.1, cmdA: ON803526.1, rpb1: ON803532.1 |
| Magnibotryascoma mali | CPC 38756 = T19_05741A = CBS 147001 | New Zealand | Metrosideros sp. | L. Rabbidge | ON811500.1 | ON811559.1 | – | – | tef1 (first part): ON803568.1 |
| CPC 38757 = T19_05741B = CBS 146778 | New Zealand | Metrosideros sp. | L. Rabbidge | ON811501.1 | ON811560.1 | – | – | tef1 (first / second part): ON803569.1 / ON803583.1 | |
| MFLUCC 17-0933, ex-type | China | Malus halliana, decaying twigs | C. Phukhamsakda | NR_156346.1 | NG_059830.1 | MF173437.1 | – | SSU: NG_063644.1, tef1 (second part): MF173435.1 | |
| Microcera lichenicola, sp. nov. | CPC 41114 = CBS 149169, ex-type | Netherlands | Parmelia sulcata | J. Boers | ON811502.1 | ON811561.1 | – | ON803591.1 | – |
| Microcera sp. | CPC 41230 = CBS 148313 | Netherlands | Physcia tenella | J. Boers | ON811503.1 | ON811562.1 | ON803543.1 | ON803592.1 | rpb1: ON803533.1, tef1 (first part): ON803570.1 |
| Mycodiella eucalypti | CPC 29458 = CBS 142098, ex-type | Australia | Eucalyptus diversicolor, leaves | P.W. Crous | NR_155408.1 | NG_059747.1 | KY173586.1 | – | actA: KY173565.1 |
| CPC 38962 = CBS 146986 | South Africa | Syzygium cordatum, leaf litter | P.W. Crous | ON811505.1 | ON811564.1 | ON803544.1 | ON803593.1 | cmdA: ON803527.1 | |
| Neobarrmaelia hyphaenes, gen. et sp. nov. | CPC 40101 = CBS 148304, ex-type | South Africa | Hyphaene crenata, leaves | M.J. Wingfield & J. Roux | ON811507.1 | ON811566.1 | ON803546.1 | ON803594.1 | – |
| Neobarrmaelia serenoae, comb. nov. | CPC 37572 = CBS 146017, ex-type | USA | Serenoa repens, leaf | M.J. Wingfield | MT223781.1 | MT223876.1 | – | MT223730.1 | tef1 (first part): MT223709.1 |
| Neobryochiton narthecii, gen. et sp. nov. | CPC 41972 = CBS 149172, ex-type | Netherlands | Narthecium ossifragum, dead leaves | J. Boers | ON811508.1 | ON811567.1 | ON803547.1 | – | – |
| Neocamarographium carpini, gen. et comb. nov. | CPC 18919, 18918 = CBS 128781, ex-isotype | Russia | Carpinus betulus, thin, dried twigs | V. Mel’nik | NR_156250.1 | NG_058837.1 | – | – | – |
| Neocamarographium carpini, gen. et comb. nov. | CPC 25067 | Germany | Carpinus betulus,attached twig | R.K. Schumacher | ON811509.1 | – | – | – | – |
| Neofusicoccum mediterraneum | CMW 26679 = CBS 125263 | South Africa | Terminalia sericea | D. Begoude & J. Roux | MH863478.1 | MH874970.1 | KX464045.1 | KX465052.1 | tef1 (first part): GQ471780.1 |
| CPC 13137 = CBS 121718, ex-type | Greece | Eucalyptus sp. branches and leaves | P.W. Crous, M.J. Wingfield & A.J.L. Phillips | EU040221.1 | EU040221.1 | KY855815.1 | – | actA: KY855639.1, gapdh: KY855694.1 | |
| Niesslia neoexosporioides | CPC 38177 = CBS 146810, ex-type | Germany | Carex paniculata, dead leaves | R.K. Schumacher | NR_173014.1 | NG_076714.1 | – | MW890137.1 | actA: MW890027.1, tef1 (first part): MW890097.1 |
| CPC 41317 = CBS 148284 | Netherlands | Phragmites australis, dead culms | E.R. Osieck | ON811510.1 | ON811568.1 | – | ON803595.1 | actA: ON803513.1, tef1 (first part): ON803571.1 | |
| Niesslia pseudoexilis, sp. nov. | CPC 40376 = CBS 148333, ex-type | Serbia | Quercus petraea, dead leaf | D. Savić | ON811511.1 | ON811569.1 | ON803548.1 | ON803596.1 | actA: ON803514.1 |
| Nothocladosporium syzygii, gen. et sp. nov. | CPC 40091 = CBS 148289, ex-type | South Africa | Syzygium cordatum, leaves | M.J. Wingfield | ON811512.1 | ON811570.1 | – | ON803597.1 | actA: ON803515.1, tef1 (first part): ON803572.1 |
| Nothopseudocercospora dictamni, gen. et comb. nov. | CPC 39776 = CBS 148299, ex-epitype | Russia | Dictamnus albus | T.S. Bulgakov | ON811513.1 | ON811571.1 | ON803549.1 | – | actA: ON803516.1, cmdA: ON803528.1, tef1 (first part): ON803573.1 |
| Nothotrimmatostroma corymbiae, sp. nov. | CPC 40077 = CBS 148336 | South Africa | Corymbia henryi | M.J. Wingfield | ON811514.1 | ON811572.1 | – | – | – |
| CPC 40085 = CBS 148335 | South Africa | Corymbia henryi | M.J. Wingfield | ON811515.1 | ON811573.1 | – | – | – | |
| CPC 40087 = CBS 148334, ex-type | South Africa | Corymbia henryi | M.J. Wingfield & J. Roux | ON811516.1 | ON811574.1 | – | – | – | |
| Paracamarographium koreanum, gen. et comb. nov. | CBS 117159, ex-type | Korea | Cornus kousa, dead twigs | V. Mel’nik | JQ044432.1 | JQ044451.1 | – | – | – |
| Paraphoma salicis | CPC 38651 = CBS 146797 = CWU AS 7121, ex-type | Ukraine | Salix cf. alba, leaves | A. Akulov | NR_173017.1 | MW883829.1 | MW890069.1 | MW890140.1 | actA: MW890028.1 |
| CPC 39991 = CBS 148454 | Netherlands | Salix sp. | A.L. van Iperen | ON811517.1 | ON811575.1 | ON803550.1 | ON803598.1 | – | |
| Periconia pseudobyssoides | BILAS 50334 = S1-11P, ex-type | Lithuania | Heracleum sosnowskyi, dead stalks | S. Markovskaja | KC954161.1 | – | – | – | – |
| CPC 38820 = CBS 147067 | South Africa | Euphorbia ingens, leaf litter | P.W. Crous | ON811518.1 | ON811576.1 | – | – | tef1 (first / second part): ON803574.1 / ON803585.1 | |
| Phaeoisaria clematidis | CPC 39680 | Netherlands | Sambucus nigra, stems | P.W. Crous | ON811519.1 | ON811577.1 | ON803551.1 | – | SSU: ON787969.1 |
| CPC 39937 = CBS 149173 | Netherlands | Sambucus nigra, stems | A.L. van Iperen | ON811520.1 | ON811578.1 | ON803552.1 | – | – | |
| Phaeophleospora hymenocallidicola | CPC 25014 = CBS 139912, ex-type | Thailand | Leaves of epiphyte | P.W. Crous | NR_137994.1 | NG_070062.1 | – | – | – |
| CPC 40026 = CBS 148250 | USA: Puerto Rico | Mangifera indica var. palmer, leaf necrosis | – | ON811521.1 | ON811579.1 | – | – | – | |
| CPC 40027 = CBS 149175 | USA: Puerto Rico | Necrosis on fruit peduncle of Mangifera indica | – | ON811522.1 | – | – | – | – | |
| Phaeosphaeria hyphaenes, sp. nov. | CPC 40354 = CBS 148254, ex-type | South Africa | Hyphaene crenata, leaves | M.J. Wingfield & J. Roux | ON811523.1 | ON811580.1 | ON803553.1 | ON803599.1 | tef1 (first part): ON803575.1 |
| Phlyctema phoenicis | CPC 29372 = T15_05353B = CBS 142134, ex-type | New Zealand | Phoenix canariensis | R. Thangaval | NR_155690.1 | NG_067319.1 | – | KY173611.1 | – |
| CPC 38747 = CBS 147066 | New Zealand | Libertia ixioides | C. Inglis | ON811524.1 | ON811581.1 | – | ON803600.1 | actA: ON803517.1 | |
| Pseudohormonema sordidus, gen. et sp. nov. | CBS 130468 = UTHSC 07-2004, ex-type | USA | Human pacemaker | D. Sutton | ON811525.1 | ON811582.1 | – | ON803601.1 | actA: ON803518.1 |
| CBS 140365 | Saudi Arabia | Polluted soil | S. de Hoog & T.A. Moussa | ON811526.1 | ON811583.1 | – | ON803602.1 | – | |
| CBS 140366 | Saudi Arabia | Polluted soil | S. de Hoog & T.A. Moussa | ON811527.1 | – | – | ON803603.1 | – | |
| Pseudoplagiostoma eucalypti | CPC 13341 = CBS 124807, ex-type | Venezuela | Eucalyptus urophylla, living leaves | M.J. Wingfield | GU973512.1 | GU973606.1 | – | GU973575.1 | tef1 (first part): GU973542.1 |
| CPC 39762 = CBS 149183 | South Africa | Eucalyptus benthamii, leaves | J. Roux | ON811528.1 | ON811584.1 | – | ON803604.1 | tef1 (first part): ON803576.1 | |
| Pseudosoloacrosporiella cryptomeriae | CPC 39587 = CBS 148441, ex-type | Netherlands | Cryptomeria japonica, leaves | P.W. Crous | NR_175206.1 | ON811585.1 | – | – | tef1 (first part): OK651183.1 |
| Pseudosydowia phantasmae, comb. nov. | CPC 38883 = CBS 146830, ex-type | Namibia | Moringa ovalifolia, leaves | P.W. Crous | NR_171999.1 | NG_074499.1 | – | – | – |
| CPC 38950 = CBS 146982 | Namibia | Moringa ovalifolia, flower | P.W. Crous | ON811504.1 | ON811563.1 | – | – | – | |
| Quasiphoma hyphaenes, gen. et sp. nov. | CPC 40045 = CBS 148253, ex-type | South Africa | Hyphaene crenata, leaves | M.J. Wingfield & J. Roux | ON811529.1 | ON811586.1 | ON803554.1 | ON803605.1 | actA: ON803519.1 |
| Racheliella wingfieldiana | CPC 13806 = CBS 143669, ex-type | South Africa | Syzygium guineense | M.J. Wingfield | MG591911.1 | MG592006.1 | MG976487.1 | MG592192.1 | tef1 (first part): MG592100.1 |
| CPC 40039 = CBS 148251 | South Africa | Syzygium sp. | M.J. Wingfield | ON811530.1 | ON811587.1 | – | ON803606.1 | tef1 (first part): ON803577.1 | |
| Ramularia arvensis | CPC 39985 = CBS 148455, ex-epitype | Netherlands | Potentilla reptans | A.L. van Iperen | ON811531.1 | ON811588.1 | – | – | actA: ON803520.1, gapdh: ON803530.1, his3: ON803531.1, tef1 (first part): ON803578.1 |
| Rapidomyces narthecii, gen. et sp. nov. | CPC 41974 = CBS 149174, ex-type | Netherlands | Narthecium ossifragum, dead leaves | J. Boers | ON811532.1 | ON811589.1 | ON803555.1 | – | – |
| Reticulascus parahennebertii, sp. nov. | CPC 41226 = CBS 148282, ex-type | Netherlands | Juncus inflexus, dead culm | E.R. Osieck | ON811533.1 | ON811590.1 | – | – | tef1 (second part): ON803586.1 |
| Rhexocercosporidium bellocense, comb. nov. | CPC 39764 = CBS 148297, ex-epitype | Germany | Verbascum cf. densiflorum | J. Kruse | ON811535.1 | ON811592.1 | ON803557.1 | – | – |
| Rhexocercosporidium aff. bellocense | CPC 39690 = CBS 148246 | Russia | Verbascum sp. | T.S. Bulgakov | ON811534.1 | ON811591.1 | ON803556.1 | ON803607.1 | – |
| Rhopographus filicinus | CBS 384.59 = ETH 2752 | India | Pteridium aquilinum | E. Müller | MH857898.1 | ON811593.1 | – | – | – |
| CPC 41596, ex-epitype | Netherlands | Pteridium aquilinum, dead leaf fronds | P.W. Crous | ON811536.1 | ON811594.1 | ON803558.1 | – | actA: ON803521.1 | |
| CPC 41925 | Netherlands | Pteridium aquilinum, stem | P.W. Crous | ON811537.1 | ON811595.1 | – | – | actA: ON803522.1 | |
| Scytalidium philadelphianum, sp. nov. | CPC 40793 = CBS 148262, ex-type | USA: Pennsylvania | Compressed air in a factory | Ž. Jurjević | ON811538.1 | – | – | – | – |
| Septoria chelidonii | CPC 12337 = CBS 132027 | South Korea | Chelidonium majus | H.D. Shin | GU269860.1 | GU253870.1 | KF252374.1 | KF252845.1 | actA: KF253676.1, cmdA: KF254025.1, tef1 (first part): KF253319.1 |
| CPC 39746 = CBS 148456 | Russia | Chelidonium majus | T.S. Bulgakov | ON811539.1 | ON811596.1 | – | – | actA: ON803523.1, tef1 (first part): ON803579.1 | |
| Septoria robiniae | CPC 39783 = CBS 148300, ex-epitype | Belgium | Robinia pseudoacacia | C. van Steenwinkel | ON811540.1 | ON811597.1 | – | – | actA: ON803524.1, tef1 (first part): ON803580.1 |
| Teratosphaeria alcornii | CPC 13384 = CBS 121100, ex-epitype | Australia | Corymbia variegata, leaves | G. Price | EF394866.1 | KF901882.1 | KF902407.1 | KF902982.1 | actA: KF903646.1, cmdA: KF902698.1 |
| CPC 39789 = CBS 149184 | South Africa | Corymbia citriodora, leaves | J. Roux | ON811541.1 | ON811598.1 | ON803559.1 | ON803608.1 | actA: ON803525.1, cmdA: ON803529.1 | |
1BILAS: Herbarium of Institute of Botany, Nature Research Centre, Vilnius, Lithuania; BRIP: Plant Pathology Herbarium, Department of Primary Industries, Queensland, Australia; CBS: Westerdijk Fungal Biodiversity Institute, Utrecht, The Netherlands; CMW: Culture Collection of the Forestry and Agricultural Biotechnology Institute (FABI) of the University of Pretoria, Pretoria, South Africa; CPC: Culture collection of Pedro Crous, housed at CBS; ETH: Swiss Federal Institute of Technology Culture Collection, Zurich, Switzerland; FMR: Facultat de Medicina, Universitat Rovira i Virgili, Reus, Spain; MFLUCC: Mae Fah Luang University Culture Collection, Chiang Rai, Thailand; MUCL: Université Catholique de Louvain, Louvain-la-Neuve, Belgium; UTHSC: Fungus Testing Laboratory at the University of Texas Health Science Center, San Antonio, TX, USA.
2ITS: internal transcribed spacers and intervening 5.8S nrDNA; LSU: large subunit (28S) of the nrRNA gene operon; act: partial actin gene; cmdA: partial calmodulin gene; gapdh: partial glyceraldehyde-3-phosphate dehydrogenase gene; his3: partial histone H3 gene; rpb1: partial DNA-directed RNA polymerase II largest subunit gene; rpb2: partial DNA-directed RNA polymerase II second largest subunit gene; SSU: small subunit (18S) of the nrRNA gene operon; tef1: partial translation elongation factor 1-alpha gene; tub2: partial beta-tubulin gene.