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. 2022 Jul 5;39(2):213–244. doi: 10.1007/s12264-022-00897-8

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© The Author(s) 2022

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 2 — Cataloguing resident cells during glial scar maturation with ST. A UMAP spots showing the re-clustering analysis of cluster 2 cells and cluster 3 cells from four stages of scar maturation. B Histogram showing the number of spots in each subpopulation. C Bar plot showing the fraction of all spots comprising each subpopulation at different stages of scar maturation. D UMAP spots embedding overlay showing the distribution of spots at different time points after injury. E UMAP spots embedding overlay showing the six main cell clusters at different time points after injury. F Heat map showing the top 10 markers for the annotation of individual clusters shown as fraction of expression (color) of gene markers (columns). G Spatial maps showing the six main cell clusters at different time points after injury. H Spatial maps showing the GSVA scores of wound healing enriched in the six main cell clusters at different time points after injury.