Chemicals, peptides, and recombinant proteins |
QD605 streptavidin conjugated quantum dot |
Thermo Fisher Scientific |
Cat#Q10101MP |
Platinum black |
Sigma-Aldrich |
Cat#205915 |
Sodium formate BioUltra, ≥99.0% (NT) |
Sigma-Aldrich |
Cat#71359 |
Chloramphenicol |
Sigma-Aldrich |
Cat#C0378 |
Carbon dioxide (13C, 99%) (<2% 18O) |
Cambridge Isotope Laboratories |
CLM-185-5 |
Poly(vinylidene fluoride-co-hexafluoropropylene) |
Sigma-Aldrich |
427179 |
PTFE Hydrophilic Membrane Filters, 0.22 μm, 90 mm |
Scientificfilters.com/Tisch Scientific |
SF13842 |
Critical commercial assays |
Folic Acid (FA) ELISA kit |
Alpha Diagnostic International |
Cat# 0365-0B9 |
TMT10plex Isobaric Label Reagent Set |
Thermo Fisher |
A37725 |
Surface Plasmon Resonance CM5 kit |
GE Healthcare |
Cat#29104988 |
NanoBRET Target Engagement K-5 kit |
Promega |
Cat#N2500 |
Deposited data |
B-RAF RBD (apo) structure |
This paper |
PDB: 5J17 |
Structure of compound 5 |
This paper; Cambridge Crystallographic Data Center |
CCDC: 2016466 |
Code for constraints-based modeling and analysis of autotrophic E. coli
|
This paper |
https://gitlab.com/elad.noor/sloppy/tree/master/rubisco
|
Software and algorithms |
Gaussian09 |
Frish et al.1
|
https://gaussian.com
|
Python version 2.7 |
Python Software Foundation |
https://www.python.org
|
ChemDraw Professional 18.0 |
PerkinElmer |
https://www.perkinelmer.com/category/chemdraw
|
Weighted Maximal Information Component Analysis v0.9 |
Rau et al.2
|
https://github.com/ChristophRau/wMICA
|
Other |
DASGIP MX4/4 Gas Mixing Module for 4 Vessels with a Mass Flow Controller |
Eppendorf |
Cat#76DGMX44 |
Agilent 1200 series HPLC |
Agilent Technologies |
https://www.agilent.com/en/products/liquid-chromatography
|
PHI Quantera II XPS |
ULVAC-PHI, Inc. |
https://www.ulvac-phi.com/en/products/xps/phi-quantera-ii/
|