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. 2023 Jan 26;14:1076533. doi: 10.3389/fphys.2023.1076533

FIGURE 1.

FIGURE 1

Templates and content. VFB has templates that integrate image data into common coordinate spaces and many more that serve as references for datasets in their native space The first four rows of the table provide details of the most up-to-date integrative templates on VFB: the JRC2018 unisex adult brain template (Bogovic et al., 2019) has the largest number of aligned images, which include over 26,500 EM images from CATMAID FAFB (Zheng et al., 2018) and the Janelia Hemibrain (Scheffer et al., 2020) combined, over 70,000 images showing expression patterns or fragments of expression patterns from sources including FlyCircuit (Chiang et al., 2010; Shih et al., 2015) and Janelia FlyLight (Meissner et al., 2022) and 46 painted neuropil domains (painted by Kazunori Shinomiya); The JRC2018 adult ventral nerve cord (VNC) template (Bogovic et al., 2019) has over 2,000 EM images from CATMAID FANC (Phelps et al., 2021), over 18,000 images of expression patterns from sources including FlyLight and 21 painted domains (Court et al., 2020) The Seymour L1 template has nearly 3,500 EM images from CATMAID L1 (Ohyama et al., 2015); The Wood2018 template has 255 painted domains (David Wood and Volker Hartenstein, unpublished). The rest of the table provides details of three of the available reference templated on VFB: the McKellar2020 adult head template has painted domains showing the adult pharyngeal musculature (McKellar et al., 2020); the hemibrain has the hemibrain connectome in its native space, along with a more detailed parcellation scheme (Scheffer et al., 2020); the Ito half-brain is the original reference template and parcellation scheme for the BrainName standard (Ito et al., 2014).