TABLE 1.
Cross-validation | Feature | Dimension | AUROC | Sn | Sp | Acc | Mcc |
10-fold cross-validation | AAC | 20 | 0.91 | 0.85 | 0.84 | 0.85 | 0.69 |
TPAAC | 21 | 0.90 | 0.83 | 0.78 | 0.80 | 0.61 | |
APAAC | 22 | 0.89 | 0.83 | 0.81 | 0.82 | 0.64 | |
ASDC | 400 | 0.88 | 0.89 | 0.68 | 0.79 | 0.59 | |
DPC | 400 | 0.86 | 0.87 | 0.64 | 0.76 | 0.53 | |
DDE | 400 | 0.83 | 0.84 | 0.73 | 0.78 | 0.57 | |
GAAC | 5 | 0.75 | 0.72 | 0.66 | 0.69 | 0.39 | |
GDPC | 25 | 0.78 | 0.75 | 0.71 | 0.73 | 0.46 | |
SOCNumber | 2 | 0.70 | 0.66 | 0.62 | 0.64 | 0.28 | |
QSOrder | 42 | 0.89 | 0.82 | 0.82 | 0.82 | 0.64 | |
Independent set validation | AAC | 20 | 0.96 | 0.91 | 0.89 | 0.90 | 0.80 |
TPAAC | 21 | 0.94 | 0.83 | 0.86 | 0.84 | 0.69 | |
APAAC | 22 | 0.97 | 0.89 | 0.91 | 0.90 | 0.80 | |
ASDC | 400 | 0.92 | 0.89 | 0.75 | 0.82 | 0.65 | |
CKSAAGP | 100 | 0.87 | 0.77 | 0.81 | 0.79 | 0.58 | |
DPC | 400 | 0.89 | 0.88 | 0.70 | 0.79 | 0.59 | |
DDE | 400 | 0.90 | 0.89 | 0.84 | 0.87 | 0.74 | |
GAAC | 5 | 0.76 | 0.83 | 0.64 | 0.73 | 0.48 | |
GDPC | 25 | 0.80 | 0.73 | 0.72 | 0.73 | 0.45 | |
SOCNumber | 2 | 0.73 | 0.59 | 0.69 | 0.64 | 0.28 | |
QSOrder | 42 | 0.95 | 0.92 | 0.84 | 0.88 | 0.77 |
Best performance metrics are shown in bold.