Table 2.
ELAVL4 knock out | ELAVL4 overexpression | ELAVL4 rescue in knock out | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ||||||||||||||||
RNAseq | Protein | RNAseq | RNAseq | Protein | ||||||||||||
fAD corrected | fAD | fAD corrected | fAD | fAD corrected | fAD | fAD corrected | fAD | |||||||||
Gene | FC | FDR-P | FC | FDR-P | FC | FDR-P | FC | FDR-P | FC | FDR-P | FC | FDR-P | FC | FDR-P | FC | FDR-P |
ELAVL4/HuD | −4,47 | 2,86E-37 | 3,24 | 8,13E-34 | N.A. | N.D. | 2,86 | 8,49E-33 | 2,62 | 2,25E-31 | 15,14 | 3,11E-48 | 9,40 | 1,13E-45 | 1,635 | 1,21E-11 |
CAMK2A | 1,92 | 8,26E-12 | 1,10 | 2,42E-01 | N.A. | N.D. | −1,26 | 5,71E-02 | −1,29 | 3,13E-02 | −1,96 | 1,30E-10 | −1,53 | 1,43E-05 | N.A | N.D. |
BDNF | 1,17 | 4,83E-03 | −1,19 | 1,55E-01 | N.A. | N.D. | −1,13 | 1,89E-01 | −1,04 | 7,80E-01 | −1,18 | 1,13E-02 | −1,15 | 3,58E-02 | N.A | N.D. |
GAP43 | −1,07 | 4,00E-03 | 1,11 | 1,19E-04 | 1,21 | 1,05E-03 | 1,09 | 1,17E-02 | 1,12 | 1,07E-03 | 1,14 | 9,46E-06 | 1,07 | 3,02E-02 | −1,19 | 1,89E-03 |
APP | 1,16 | 7,03E-13 | −1,06 | 4,32E-04 | N.A. | N.D. | 1,02 | 4,51E-01 | −1,10 | 8,38E-02 | −1,05 | 4,18E-03 | −1,03 | 1,16E-01 | N.A | N.D. |
BACE1 | 1,13 | 6,71E-04 | 1,03 | 4,78E-01 | N.A. | N.D. | 1,08 | 1,26E-01 | −1,05 | 8,54E-01 | 1,01 | 8,06E-01 | 1,02 | 6,84E-01 | N.A | N.D. |
ADAM10 | −1,10 | 1,69E-03 | −1,02 | 6,53E-01 | N.A. | N.D. | −1,10 | 2,73E-02 | −1,04 | 4,74E-01 | −1,22 | 5,78E-07 | −1,12 | 3,48E-03 | N.A | N.D. |
NEP | −3,21 | 7,98E-08 | −1,23 | 3,39E-01 | N.A. | N.D. | −1,35 | 2,77E-01 | −1,14 | 7,80E-01 | −1,07 | 8,49E-01 | −1,26 | 4,01E-01 | N.A | N.D. |
SERPINI1 | 1,29 | 3,55E-13 | 1,01 | 7,54E-01 | N.A. | N.D. | −1,04 | 4,02E-01 | −1,06 | 2,30E-01 | −1,01 | 7,64E-01 | −1,07 | 4,68E-02 | N.A | N.D. |
TAU | −1,02 | 5,66E-01 | −1,02 | 4,84E-01 | 1,09 | 6,02E-01 | 1,15 | 1,48E-04 | 1,38 | 6,24E-01 | 1,16 | 2,85E-06 | 1,11 | 4,07E-04 | 1,08 | 5,07E-01 |
ACHE | 1,02 | 6,09E-01 | −1,10 | 5,86E-03 | N.A. | N.D. | 1,18 | 2,15E-04 | 1,18 | 1,26E-04 | 1,30 | 1,63E-09 | 1,20 | 3,80E-06 | N.A | N.D. |
Abbreviations: FC, Fold change; FDR-P, FDR corrected P-value