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. 2023 Jan 31;15(3):901. doi: 10.3390/cancers15030901

Table 1.

The molecular interactions between compounds and the active site residues of isethionate sulfite-lyase.

Compound Name Docking Score Ligand Atoms Receptor Residues Bonds Distance (Å) Energy (kcal/mol)
7KQ3 2-hydroxyethylsulfonic acid −5.55 O6 OE2-GLU470 HBD 2.31 −0.9
O4 NH1-ARG189 HBA 2.68 −7.0
O4 N-GLN193 HBA 3.41 −0.8
O5 NH2-ARG189 HBA 2.76 −7.2
O5 NH2-ARG678 HBA 3.09 −5.5
O65 N-CYS468 HBA 2.98 −1.9
O76 NE2GLN193 HBA 2.94 −3.9
O76 NH1-ARG678 HBA 3.16 −4.9
O43 NH1-ARG189 Ionic 2.68 −7.0
O43 NH2-ARG189 Ionic 3.43 −2.2
O54 NH1-ARG189 Ionic 3.69 −1.2
O54 NH2-ARG189 Ionic 2.76 −6.3
O54 NH2-ARG678 Ionic 3.09 −3.9
O76 NH1-ARG678 Ionic 3.16 −3.5
CP1 3-carbamoyl-5-fluoropyrazin-2-olate −6.62 N6 OG1-THR312 HBD 2.88 −4.6
N3 NH2-ARG678 HBA 2.89 −3.7
O7 NH1-ARG189 HBA 2.76 −2.3
O7 N-GLN193 HBA 3.06 −1.9
O10 NH2-ARG189 HBA 2.76 −3.1
CP2 5-(1H-indol-2-yl)-1,3,4-oxadiazole-2(3H)-thione −6.35 N7 OE2-GLU470 HBD 2.98 −2.2
N13 OE1-GLN544 HBD 2.71 −6.6
S15 N-ALA484 HBA 3.33 −1.9
5-ring NH2-ARG678 π-cation 3.43 −0.5
CP4 (E)-2-(1-(2,5-dimethylthiophen-3-yl)ethylidene)-N-ethylhydrazine-1-carbothioamide −6.24 N14 O-TYR587 HBD 2.67 −1.8
N3 NH2-ARG189 HBA 2.91 −1.1
S13 CE1-TYR485 HBA 3.40 −0.5
CP5 (E)-2-(4-nitrobenzylidene)hydrazine-1-carbothioamide −6.23 N4 OG1-THR185 HBD 2.95 −2.0
N7 O-TYR587 HBD 2.92 −1.2
N3 ANH2-RG189 HBA 2.87 −6.2
S6 N-GLY483 HBA 3.20 −2.0
S6 N-TYR587 HBA 3.23 −2.9
O14 NH1-ARG678 HBA 2.78 −1.9
O14 NH2-ARG678 HBA 3.18 −0.7
O15 N-CYS468 HBA 2.82 −2.4
O15 SG-CYS468 HBA 3.04 −0.8
CP8 4-amino-5-(pyridin-4-yl)-2,4-dihydro-3H-1,2,4-triazole-3-thione −5.58 N2 N-CYS468 HBA 3.41 −2.5
S13 N-TYR587 HBA 3.58 −0.9
5-ring NH2-ARG189 π-cation 3.12 −0.6
CP9 4-amino-5-(pyridin-3-yl)-2,4-dihydro-3H-1,2,4-triazole-3-thione −5.35 N10 O-TYR587 HBD 2.93 −2.7
S13 CA-GLY586 HBA 3.50 −1.6
S13 N-TYR587 HBA 3.03 −3.4

HBA = hydrogen bond acceptor; HBD = hydrogen bond donor.