Table 1.
Binding interaction summary of PlzAWT and the tested nucleic acids at various c-di-GMP concentrations.
| glpFKD(−7/+35) dsDNA | |||
|---|---|---|---|
|
| |||
| c-di-GMP (μM) | Kd(app) (μM), 95% C.I. [LL, UL] | Bmax (% Shifted), 95% C.I. [LL, UL] | Adj. R-squared |
|
| |||
| 100 | 1.09, [0.97, 1.23] | 105.20, [102.20, 108.40] | 0.986 |
| 50 | 1.25, [1.08, 1.45] | 105.50, [101.50, 109.90] | 0.981 |
| 25 | 1.33, [1.10, 1.59] | 101.60, [96.58, 107.10] | 0.971 |
| 10 | 2.81, [1.98, 4.02] | 113.00, [98.79, 132.30] | 0.940 |
| Equimolar | 4.22, [3.40, 5.26] | 115.40, [104.40, 129.10] | 0.983 |
| 0 | 7.86, [4.85, 14.06] | 94.25, [71.72, 138.80] | 0.950 |
| glpFKD(UTR) RNA | |||
|
| |||
| c-di-GMP (μM) | Kd(app) (μM), 95% C.I. [LL, UL] | Bmax (% Shifted), 95% C.I. [LL, UL] | Adj. R-squared |
|
| |||
| 100 | 0.95, [0.73, 1.22] | 102.6, [96.76, 109.20] | 0.930 |
| Equimolar | 4.14, [2.79, 6.30] | 106.7, [89.50, 132.60] | 0.944 |
| 0 | 7.64, [4.71, 13.66] | 87.73, [66.88, 128.80] | 0.950 |
| glpF ssDNA | |||
|
| |||
| c-di-GMP (μM) | Kd(app) (μM), 95% C.I. [LL, UL] | Bmax (% Shifted), 95% C.I. [LL, UL] | Adj. R-squared |
|
| |||
| 100 | 4.42, [2.94, 6.84] | 102.80, [85.32, 129.90] | 0.920 |
| 0 | 8.74, [5.67, 14.70] | 82.04, [63.53, 116.90] | 0.950 |