Table 2.
Summary of the raw data generated by sequencing of the three groups (mock, ToLCNDV-India, and ToLCNDV-ES).
| Index | Infected Condition | Sample ID | Total Read Bases | Total Reads | GC (%) | Q20 (%) | Q30 (%) |
|---|---|---|---|---|---|---|---|
| 1 | ToLCNDV-ES | I-NDV-1-1 | 4,258,032,538 | 42,158,738 | 45.16 | 98.9 | 96.45 |
| 2 | ToLCNDV-ES | I-NDV-1-2 | 4,264,281,004 | 42,220,604 | 45.62 | 98.95 | 96.54 |
| 3 | ToLCNDV-ES | I-NDV-2-1 | 3,917,026,238 | 38,782,438 | 45.41 | 98.9 | 96.41 |
| 4 | ToLCNDV-ES | I-NDV-2-2 | 3,668,776,722 | 36,324,522 | 45.09 | 98.98 | 96.54 |
| 5 | Mock | Mock 1-1 | 3,895,794,422 | 38,572,222 | 45 | 98.89 | 96.38 |
| 6 | Mock | Mock 1-2 | 3,596,973,600 | 35,613,600 | 44.75 | 98.89 | 96.34 |
| 7 | Mock | Mock 2-1 | 3,797,215,190 | 37,596,190 | 44.95 | 98.84 | 96.22 |
| 8 | Mock | Mock 2-2 | 3,931,060,996 | 38,921,396 | 45 | 98.88 | 96.29 |
| 9 | ToLCNDV-India | Pa-NDV-1-1 | 3,523,436,914 | 34,885,514 | 44.79 | 97.54 | 92.9 |
| 10 | ToLCNDV-India | Pa-NDV-1-2 | 4,123,268,238 | 40,824,438 | 44.95 | 97.74 | 93.41 |
| 11 | ToLCNDV-India | Pa-NDV-2-1 | 4,111,628,796 | 40,709,196 | 44.98 | 97.58 | 93.02 |
| 12 | ToLCNDV-India | Pa-NDV-2-2 | 3,201,276,608 | 31,695,808 | 44.97 | 97.42 | 92.7 |