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. 2023 Jan 28;24(3):2511. doi: 10.3390/ijms24032511

Table 1.

Primers utilized in this research study with the aim of optimizing a one-step reverse transcription-recombinase polymerase amplification (RT-RPA) technique.

Target Virus Primer Set No. Primers Polarity Sequence 5′–3′ Bases Target Position on Coat Protein Gene Position on Accession Number in NCBI
GeneBank
(NC_001747.1)
GC (%) Tm (°C) Amplicon Size (bp)
PLRV A LRRPAF1 Sense GTATAAGATCACAAGCATCTTACTTCAGTTC 31 327–357 4019–4267 35.5 61.3 249
LRRPAR1 Antisense GTATCTGAAGATTTTCCATTTCCCTTC 27 548–575 37 62.5
B LRRPAF2 Sense TAAGATCACAAGCATCTTACTTCAGTTC 28 330–357 4022–4267 35.7 60.5 246
LRRPAR2 Antisense GTATCTGAAGATTTTCCATTTCCCTTC 27 548–575 37 62.5
C LRRPAF3 Sense ACTCAAGGCCTACCATGAGTATAAGAT 27 309–335 4001–4183 40.7 60.9 153 *
LRRPAR3 Antisense GTAATTTGGAACTTGTTGACGTAGGACT 28 434–461 39.3 63

* The best selected for optimization and validation of one-step RT-RPA.