Table 4.
Functional annotation of the transcription factor genes related to sugarcane tillering and ratooning.
QTL Name | Candidate Genes | Gene Description |
---|---|---|
qPCTR-Y8-1/(qRSR-Y8) | Soffic.03G0018200-4E a | Gibberellin-ACID insensitive, repressor of gai1-3 and scarecrow (GRAS) |
Soffic.03G0018550-2P a | C2H2 zinc-finger protein (C2H2-ZFP) transcription factors (C2H2) | |
Soffic.03G0018550-1P a | C2H2 zinc-finger protein (C2H2-ZFP) transcription factors (C2H2) | |
Soffic.05G0000090-4P a | ethylene responsive factor (ERF) | |
Soffic.09G0002040-4E a | Cysteine3Histidine (C3H) gene family (C3H) | |
qPCTR-Y8-2 | Soffic.02G0010890-1P b | basic region leucine zipper (bZIP) |
Soffic.03G0019220-2E b | Trihelix transcription factors (Trihelix) | |
Soffic.09G0002240-5P b | NAC transcription factor (NAC) |
Note: a represents genes associated with both tillering and ratooning; b represents genes associated with tillering.