Table 2.
SNP | CHR | Position | REF | ALT | Nearby Gene | Beta | SE | p_value | Explained variance | F-statistics |
---|---|---|---|---|---|---|---|---|---|---|
rs3755967 | 4 | 72,609,398 | C | T | GC | − 0.10037 | 0.011 | 1.78 × 10−20 | 0.0169 | 86.02529 |
rs10832254 | 11 | 14,434,698 | A | G | COPB1 | − 0.08010 | 0.009 | 3.23 × 10−17 | 0.0139 | 71.20003 |
rs12803256 | 11 | 71,132,868 | A | G | ACTE1P | 0.05003 | 0.011 | 1.96 × 10−06 | 0.0045 | 22.63105 |
rs2144530 | 14 | 39,552,484 | C | T | SEC23A | − 0.03662 | 0.010 | 0.000282 | 0.0025 | 13.18342 |
rs3814995 | 19 | 36,342,212 | C | T | NPHS1 | − 0.03342 | 0.010 | 0.000605 | 0.0023 | 11.75963 |
rs1229984 | 4 | 100,239,319 | T | C | ADH1B | 0.03333 | 0.011 | 0.00261945 | 0.0018 | 9.05529 |
rs4575545 | 16 | 79,755,446 | G | A | MAFTRR, LINC01229 | − 0.03249 | 0.011 | 0.00276995 | 0.0018 | 8.95309 |
rs6724965 | 2 | 101,440,151 | A | G | NPAS2 | − 0.02837 | 0.010 | 0.00295511 | 0.0017 | 8.83494 |
rs7519574 | 1 | 34,726,552 | G | A | C1orf94 | − 0.07541 | 0.027 | 0.00514931 | 0.0017 | 7.82622 |
rs8121940 | 20 | 52,742,306 | C | G | BCAS1, CYP24A1 | − 0.04614 | 0.017 | 0.00648466 | 0.0015 | 7.41040 |
rs2012736 | 2 | 234,622,379 | C | A | UGT1A5 | − 0.03686 | 0.014 | 0.00838168 | 0.0014 | 6.95009 |
rs8091117 | 18 | 28,919,794 | C | A | DSG1 | − 0.05525 | 0.022 | 0.0134677 | 0.0012 | 6.10659 |
rs35823191 | 1 | 17,560,123 | T | C | PADI1 | − 0.02786 | 0.013 | 0.0320312 | 0.0009 | 4.59680 |
rs11732896 | 4 | 88,287,993 | G | A | HSD17B11 | − 0.02169 | 0.010 | 0.0344214 | 0.0009 | 4.47363 |
Chr Chromosome position: Chromosomal Position (hg19), REF Reference allele, ALT Alternative allele, SE Standard error, Approximate F-statistics which is calculated from the formula (beta/se)2.