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. 2023 Jan 30;28(3):1315. doi: 10.3390/molecules28031315

Table 3.

Average RMSD, RMSF, and RoG values for LOX in the bound and free state, and binding affinity of docked complexes during molecular dynamics simulation.

RMSD (Å)
(Mean ± SEM)
RMSF (Å)
(Mean ± SEM)
RoG (Å)
(Mean ± SEM)
Binding Affinity
(kcal/mol)
LOX-BHT 1.58 ± 3.12e−4 10.62 ± 0.14 44.30 ± 4.49e−5 −19.71
LOX-carvacrol 1.77 ± 4.57e−4 9.08 ± 0.11 44.30 ± 4.95e−5 −22.79
LOX 1.30 ± 4.33e−4 8.50 ± 0.11 44.29 ± 5.64e−5

RMSD—root-mean-square deviation; RMSF—root-mean-square fluctuation; RoG—radius of gyration; SEM—standard error of the mean; LOX—lipoxygenase.