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. 2022 Dec 31;13(1):73–84. doi: 10.34172/bi.2022.23523

Table 2. Binding affinity and interactions of in silico potential molecules against NF-κB (1BFT) .

Ligands Binding affinity (kcal/mol) Amino acids involved and Distance (A°)
Hydrogen binding interactions Hydrophobic interactions Electrostatic interactions
Epigallocatechin gallate -6.8 ARG A:201 (3.03), SER A:203 (3.57), ASP A:210 (3.83), ASN A:200 (4.40). ARG A:201 (4.78), ARG A:201 (5.30) -
Trimethoxy Flavone -6.0 ARG B:201 (4.01), GLU B: 211 (3.93) ARG A:201 (6.06) ARG B:253 (7.27)
Mesalazine -4.8 CYS A:197 (3.43), VAL B:244 (4.58), ALA B:242 (4.72), ARG B: 246 (5.05), HIS B:245 (3.56) ARG A:198 (6.05), CYS A:197 (5.56), HIS A:245 (4.35) -