Table 3.
Metadata from RNA-seq datasets, only including log2FC values with P < 0.05
| Reference PMID* | Strain | Conditions | Duration | CNAG_00342 log2FC | CNAG_05940 log2FC |
|---|---|---|---|---|---|
| 31666517 | H99 | 37 °C, YPD | 1 h | – | – |
| 28376087 | H99 | 37 °C, YPD | 2 h | 0.91 | – |
| 24743168 | H99 | 37 °C, YPD | Grown at 37 °C until stationary | – | – |
| 31860441_CSF | H99 | Rabbit CSF | 24 h | 2.76 | 2.50 |
| 31860441 | H99 | 37 °C, 5%, CO2, macrophage | 24 h | 6.30 | 4.40 |
| 22174677 | H99 | 37 °C, 5% CO2, DMEM | 1.5 h | – | – |
| 27094327 | KN99α | 37 °C, 5% CO2, DMEM | 1.5 h | – | −1.14 |
| 27094327_TM | KN99α | 37 °C, 5% CO2, DMEM | 1.5, 3, 8, and 24 h | 0.37 | −0.57 |
| 33688010 | KN99α | 37 °C, 5% CO2, DMEM | 24 h | −4.75 | −3.23 |
*Dataset 31860441_CSF indicates analysis of Cryptococcus neoformans samples from cerebrospinal fluid in vivo infections, opposed to cryptococcal samples incubated in the described conditions in vitro. Dataset 27094327_TM indicates analysis of an array of time points as a time course model, opposed to analysis of a single time point closest to the other datasets for consistency.