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. 2022 Dec 12;11(1):e03683-22. doi: 10.1128/spectrum.03683-22

TABLE 2.

Correlations of α diversity and typical ASVs (the top 10 most abundant) with environmental factors based on correlation and random forest model

Bacterioplankton
Pathogens
ASV and index R 2 Adjusted R2 P value ASV and index R 2 Adjusted R2 P value
ASVs
 ASV1 0.8155 0.7750 1.43E-20 ASV8 0.2766 0.2600 7.63E-07
 ASV3 0.9301 0.9241 1.28E-44 ASV197 0.3150 0.2911 3.70E-07
 ASV4 0.9114 0.8935 9.67E-33 ASV240 0.2991 0.2830 1.93E-07
 ASV5 0.8537 0.8352 7.36E-29 ASV260 0.2881 0.2718 3.80E-07
 ASV2 0.8776 0.8528 1.21E-27 ASV278 0.2989 0.2828 1.96E-07
 ASV6 0.9018 0.8865 9.70E-34 ASV340 0.5010 0.4836 5.56E-13
 ASV9 0.8987 0.8873 4.91E-36 ASV611 0.2326 0.2150 9.94E-06
 ASV10 0.8003 0.7721 7.34E-23 ASV757 0.8128 0.7836 3.60E-23
 ASV12 0.6510 0.6257 4.29E-17 ASV881 0.9280 0.9189 6.99E-41
 ASV7 0.8023 0.7772 8.63E-24 ASV1082 0.6231 0.6006 1.71E-16
Indices
 Richness 0.9026 0.8888 8.69E-35 Richness 0.7780 0.7434 2.08E-20
 Shannon 0.8763 0.8570 6.20E-30 Shannon 0.6722 0.6260 8.50E-15
 Pielou 0.8594 0.8396 1.13E-28 Pielou 0.7672 0.7237 2.58E-18
 Chao 1 0.8967 0.8850 1.08E-35 Chao 1 0.7600 0.7262 7.57E-20
 ACE 0.8953 0.8835 1.83E-35 ACE 0.7083 0.6834 1.79E-19
 PD 0.8070 0.7880 7.91E-26 PD 0.7770 0.7456 4.75E-21