Appendix 5—table 5. RT-PCR analysis of 13 mRNAs isolated via MT bench pull-down or via magnetic beads RIP and for 3 different RBPs (YB-1, HuR, and FUS).

		MT bench			IP (beads)
mRNA\ Bait	YB-1	HuR	FUS	YB-1	HuR	FUS
fnbp1	0.733	–0.339	1.032	0.429	0.227	0.641
rpl8	–0.436	–1.647	–1.976	0.098	–2.546	–1.232
eif4g1	1.697	0.009	0.024	1.527	0.176	1.258
gapdh	–0.228	–2.772	–2.834	0.294	–3.616	–1.609
ubl3	0.356	1.439	2.073	0.094	1.297	1.658
canx	–0.227	1.013	2.286	–0.367	1.555	0.770
actin	–1.661	–0.855	–3.051	–2.007	–0.074	–1.716
eif4g2	0.546	–0.118	1.458	1.117	0.037	0.324
nin	0.906	0.371	2.806	0.859	0.824	2.259
calr	0.403	–0.405	–1.801	–0.357	0.893	–1.163
cdk1	0.137	1.050	0.569	0.954	1.558	0.896
oaz1	–1.783	–0.940	–3.758	–1.310	–0.976	–2.189
mkln1	0.418	0.196	1.974	–0.127	–0.256	0.103