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. 2023 Feb 14;14:832. doi: 10.1038/s41467-023-36544-7

Fig. 4. Local genetic correlation annotation improves PRS prediction accuracy for 31 traits in East Asians.

Fig. 4

a The percentage relative increase in R2 for prediction accuracy of annotation-informed European PRS over PRS-CSx European PRS. A list of trait acronyms can be found in Supplementary Data 7. b The percentage relative increase in R2 for prediction accuracy of annotation-informed over PRS-CSx European PRS using only annotated and non-annotated SNPs (n = 31 traits). In the boxplot, the center line, box limits and whiskers denote the median, upper and lower quartiles, and 1.5 × interquartile range, respectively. c Comparison of R2 between annotation-informed European PRS using only annotated and non-annotated SNPs. Each point represents a trait. X-axis is the R2 for PRS based on non-annotated SNPs. Y-axis is the R2 for PRS based on annotated SNPs.