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. 2023 Jan 13;42(4):e110620. doi: 10.15252/embj.2022110620
Reagent Source Identifier
Antibodies
Anti‐IDH2 monoclonal antibody in mouse Abcam Cat#: ab55271; RRID: AB_943793
Purified Mouse Anti‐Human Hif1‐α monoclonal antibody in mouse Santa Cruz Biotechnologies Cat#: sc‐13515; RRID: AB_627723
Carbonic anhydrase IX monoclonal antibody in mouse BioScience Cat# DF13218; RRID: AB_2846237
Anti‐GLUT1 (A‐4) monoclonal antibody in mouse Santa Cruz Biotechnologies Cat# sc‐377228; RRID: AB_2190936
Anti‐TIGAR polyconal antibody in rabbit Invitrogen Cat# PA1‐41487; RRID: AB_2259272
PKM2 (D78A4) XP Rabbit monocloncal antibody in rabbit Cell Signaling Technology Cat# 4053; RRID: AB_1904096
LDHA‐Specific polyclonal antibody in rabbit Proteintech Cat# 199871‐1‐AP
Anti‐ G6PD imonocloncal antibody in mouse Santa Cruz Biotechnologies Cat# sc‐373886; RRID: AB_10918100
Anti‐TKT polyclonal antibody produced in rabbit Sigma‐Aldrich Cat#HPA029481; RRID: AB_10558885
Anti‐CTPS1 (416‐430) polyclonal antibody produced in rabbit Sigma‐Aldrich Cat# SAB1101072; RRID: AB_10606733
Anti‐PHD2 polyclonal antibody in rabbit Invitrogen Cat# PA1‐16525; RRID: AB_568563
Ki‐67, mouse monoclonal anibody Dako # Cat: M7240
Anti‐β‐actin monoclonal antibody in mouse Sigma‐Aldrich #Cat: A5441
Chemicals
Cisplatin Nippon Kayaku N/A
Gemcitabine Nippon Kayaku N/A
2'‐Deoxycytidine Sigma‐Aldrich #Cat: D3897
AGI6780 Selleck Chemicals #Cat: S7241
AGI221 (Enadesinib) Cayman Chemical #Cat: 21277
[13C5]‐glutaime Millipore Sigma #Cat: 605166
G6PD‐inhibitor Selleck Chemicals #Cat: S9617
Leflunomide Selleck Chemicals #Cat: S1247
Mizoribine Selleck Chemicals #Cat: S1384
BPTES Selleck Chemicals #Cat: S7753
2'‐Deoxyadenosine monohydrate Selleck Chemicals #Cat: S9351
2'‐Deoxyguanosine monohydrate Selleck Chemicals #Cat: S9007
Thymidine Selleck Chemicals #Cat: S4803
Galiiac acid Selleck Chemicals #Cat: S4603
Digoxin Selleck Chemicals #Cat: S4290
Buthionine Sulfoximine Sigma‐Aldrich #Cat: 415383
Critical commercial assays
Blood & Cell Culture DNA extraction Kits Qiagen #Cat: 13323
Cell Tox Green Cytotoxicity Assay Promega #Cat: G8741
NADP/NADPH Quantitation Colorimetric Kit Biovision #Cat: K347‐100
CellROX® Orange Thermo Fischer Scientific #Cat: C10443
GSH‐Glo Glutathione Promega #Cat: V6911
Dharmafect transfection Reagent 1 Thermo Fischer Scientific #Cat: T‐2001
Xfect™ Transfection Reagent Takara Bio 631317Z1317N
pcDNA™3.1 (+) Mammalian Expression Vector Invitrogen V79020
Seahorse XF Glycolytic Rate Assay Kit Agilent Technologies 103344‐100 XF
Seahorse XFe24 FluxPak mini Agilent Technologies 102342‐100
Seahorse XF RPMI assay medium pack Agilent Technologies 103681‐100
Experimental models: cell lines
Human: T24 American Type Culture Collection #Cat: ATCC HTB‐4
Human: UMUC3 American Type Culture Collection #Cat: ATCC CRL‐1749
Human: J82 American Type Culture Collection #Cat: ATCC HTB‐1
Experimental models: oraganisms/strains
BALB/cAJcl‐nu/nu CLEA Japan, Inc. #Cat: 6496
Oligonucleotides
Taqman Probe hIDH2 Applied Biosystems Hs00953879_m1
Taqman Probe hEGLN1 Applied Biosystems Hs00254392_m1
Taqman Probe hHIF1A Applied Biosystems Hs00153153_m1
Taqman Probe hGLUT1 Applied Biosystems Hs00892681_m1
Taqman Probe hG6PD Applied Biosystems Hs00166169_m1
Taqman Probe hCTPS1 Applied Biosystems Hs01041852_m1
Taqman Probe hTIGAR Applied Biosystems Hs00608644_m1
Taqman Probe hTKT Applied Biosystems Hs0115545_m1
Taqman Probe hPKM2 Applied Biosystems Hs00987255_m1
Taqman Probe hLDHA Applied Biosystems Hs03405707_g1
Taqman Probe hDHODH Applied Biosystems Hs00361406_m1
Taqman Probe hUMPS Applied Biosystems Hs00923517_m1
Taqman Probe hCTPS2 Applied Biosystems Hs00219845_m1
Taqman Probe hTYMS Applied Biosystems Hs00426586_m1
Taqman Probe hIMPDH1 Applied Biosystems Hs04190080_gH
Taqman Probe hATIC Applied Biosystems Hs00269671_m1
Taqman Probe hPFAS Applied Biosystems Hs00389822_m1
Taqman Probe hATIC Applied Biosystems Hs00269671_m1
Taqman Probe hPRPS1 Applied Biosystems Hs00751338_s1
Taqman Probe hACTB Applied Biosystems Hs01060665_g1
Recombinant DNA
siRNA‐hIDH2 target sequence #1 Thermo Fischer Scientific s227
siRNA‐hIDH2 target sequence #2 Thermo Fischer Scientific 106706
Silencer siRNA Non‐targeting control Invitrogen #Cat:AM4611
siRNA‐hHIF1A target sequence #1 Thermo Fischer Scientific s6539
siRNA‐hHIF1A target sequence #2 Thermo Fischer Scientific s6541
Software and Algorithms
GraphPad Prism 8 software Graph Pad N/A
Statistical Package of Social Sciences software ver 24.0 IBM N/A