Table 3.
Summary of the quality assessment scores for the 3D predicted structures of GLYAT and GLYAT1.
| Enzyme | Template | GMQE | Procheck (Percentage in allowed region) | VERIFY3D | ERRAT |
ProSA (z-score) |
RMSD (Å) |
Comparative RMSD (Å) |
|---|---|---|---|---|---|---|---|---|
| GLYAT | 7pk1. | 0.92 | Pass (100%) | Pass (98.65%) | 92.71 | Pass (−8.69) | 0.893 | 0.339 |
| GLYATL1 | 7pk1. | 0.80 | Pass (100%) | Pass (100%) | 86.06 | Pass (−7.85) | 1.148 | 0.488 |
VERIFY3D: % of the residues with a 3D–1D score > = 0.2.
Comparative analysis: RMSD when comparing generated structures and structures from the alphafold database.