Table 4. Binding Free Energy Calculation Results Calculated in kcal/mola.
complexes | vdW | electrostatic | SA | GB | total |
---|---|---|---|---|---|
COX2-NSAID_2 | –16.47 | –25.58 | –6.33 | 23.15 | –25.23 |
COX2-sidechain_3 | –13.23 | –29.92 | –4.87 | 25.28 | –22.74 |
COX2-POX_5 | –17.66 | –35.38 | –3.37 | 29.88 | –26.53 |
TACE_2 | –18.28 | –17.62 | –7.41 | 14.23 | –29.08 |
IKK_3 | –26.36 | –21.77 | –5.32 | 30.21 | –23.24 |
iNOS_3 | –31.52 | –17.1 | –2.11 | 28.62 | –22.11 |
TNF-α_4 | –25.28 | –21.22 | –5.47 | 16.01 | –35.96 |
vdW: van der Waals; SA: surface accessible; GB: generalized born.