Table 1:
Locations of binding peaks from ChIP-seq experiments
| peak centre | gene(s)4 | site location | site sequence |
|---|---|---|---|
| HapR ChIP-seq peaks | |||
| chromosome I | |||
|
| |||
| 99874 | VC0102<(VC0103) | 99863.5 | aaattaataaaactgtcattta |
| 213457 | (VC0205)>VC0206 | 213452.5 | taattgtgattcttatcaccaa |
| 2463661 | VC0240<>VC0241 | 246349.5 | taattaagatggctataaacta |
| 463584 | VC0433 | ||
| 514422 | VC0484 | 514430.5 | ctactgaccttttcatcaataa |
| 516570 | (VC0486) | 516601.5 | caactgagaaggcacacaatag |
| 534714 | (VC0502) | 534691.5 | ctattataagctctatcagtgt |
| 547108 | VC0515 | 547135.5 | atagtaatattattgttaatag |
| 6133283 | VC0583 A | 613357.5 | ttattgagtgggtacataacaa |
| 716707 | VC0668 | 716625.5 | ctattgatgaggttatccacag |
| 735309 | VC0687<>VC0688 | ||
| 882854 | (VC0822) | 882825.5 | taattatccactttatcaattg |
| 941187 | VC0880 | 941164.5 | cttttgacatttctgtcacaaa |
| 978577 | VC0916 R | 978540.5 | taattaatatccagctcaatta |
| 1356743 | VC1280<>VC1281A | 1356736.5 | atattgatagaaataacaagtc |
| 1379202 | VC1298<>VC1299 | 1379180.5 | ttcatgatagttttgtaattat |
| 1469384 | VC1375<>VC1376 | 1469377.5 | atattgatatatcacacatctt |
| 1496023 | VC1403A<(VC1404)>VC1405 | 1496025.5 | tagttgatatttttataattgt |
| 1533842 | (VC1437) | 1533854.5 | tttgtgagtctcctgtcaataa |
| 19901332 | VC1851 | 1990076.5 | atattgagtaatcaattagtaa |
| 2364721 | (VC2212) | 2364680.5 | ctattaacagttttatttataa |
| 2509878 | VC2352 | 2509882.5 | ttagtgacagatgcgtcattaa |
| 2667349 | VC2486 | 2667368.5 | taattattaatttgaacaatag |
| chromosome II | |||
|
| |||
| 1638081 | VCA0148 | 163810.5 | taattgattattgtgtaactat |
| 214589 | (VCA0198) | 214582.5 | taattgataactttgacagtat |
| 237008 | VCA0218<>VCA0219R | 237019.5 | taaataatatgaatatcagtaa |
| 247286 | VCA0224<>VCA0225 | 247241.5 | taaatgactaataagacaatta |
| 598444 | VCA0662<>VCA0663R | 598403.5 | tttgtaataaatttgtcattaa |
| 630517 | VCA0691 A, | 630559.5 | ctattaacaggactgacattaa |
| 862737 | VCA0906 | ||
| 910196 | VCA0960R<>VCA0961 | 910181.5 | ctgattataaatttgtaaatat |
| 1021174 | VCA1070 | 1021117.5 | ctcctatccgattggtcactat |
| LuxO ChIP-seq peaks | |||
| chromosome I | |||
|
| |||
| 1090129 | qrr1<> VC1021 | 1090154 | ttgcaaaatgcaa |
| 1212442 | VC1142<>VC1143 | 1212435 | ttgcaaatcgcga |
| chromosome II | |||
|
| |||
| 48415 | qrr2 | 48347 | ttgcaatttgcaa |
| 772208 | qrr3 | 772149 | ttgcattttgcaa |
| 908445 | qrr4 | 908436 | ttgcaatttgcaa |