Table 3.
List of predictive markers selected by random forest algorithm
| HGNC ID | Approved symbol | Approved name | Mean Decrease Accuracy |
|---|---|---|---|
| HGNC:9441 | PRKX | protein kinase X-linked | 5.21 |
| HGNC:8910 | PGR | progesterone receptor | 5.05 |
| HGNC:29545 | SUDS3 | SDS3 homolog, SIN3A corepressor complex component | 4.95 |
| HGNC:704 | ARPC1B | actin related protein 2/3 complex subunit 1B | 4.72 |
| HGNC:12393 | TTC3 | tetratricopeptide repeat domain 3 | 4.69 |
| HGNC:28149 | PRR15L | proline rich 15 like | 4.54 |
| HGNC:7213 | MPHOSPH10 | M-phase phosphoprotein 10 | 4.53 |
| HGNC:20313 | PKHD1L1 | PKHD1 like 1 | 4.51 |
| HGNC:5157 | HPRT1 | hypoxanthine phosphoribosyltransferase 1 | 4.48 |
| HGNC:17582 | KAT6B | lysine acetyltransferase 6B | 4.48 |
| HGNC:18196 | SOX7 | SRY-box transcription factor 7 | 4.41 |
| HGNC:23785 | PIKFYVE | phosphoinositide kinase, FYVE-type zinc finger containing | 4.4 |
| HGNC:17814 | SLF2 | SMC5-SMC6 complex localization factor 2 | 4.36 |
| HGNC:11107 | SMARCD2 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 | 4.35 |
| HGNC:4461 | GPM6B | glycoprotein M6B | 4.33 |
| HGNC:2470 | CSRP2 | cysteine and glycine rich protein 2 | 4.31 |
| HGNC:18854 | CREB3L4 | cAMP responsive element binding protein 3 like 4 | 4.31 |
| HGNC:11615 | TCEA3 | transcription elongation factor A3 | 4.28 |
| HGNC:17947 | THEM4 | thioesterase superfamily member 4 | 4.26 |
| HGNC:2567 | OFD1 | OFD1 centriole and centriolar satellite protein | 4.25 |
| HGNC:4330 | GLRX | glutaredoxin | 4.24 |
| HGNC:24663 | RABGAP1L | RAB GTPase activating protein 1 like | 4.2 |
| HGNC:17811 | AMOTL1 | angiomotin like 1 | 4.19 |
| HGNC:4183 | GBP2 | guanylate binding protein 2 | 4.14 |
| HGNC:26323 | ANKRD35 | ankyrin repeat domain 35 | 4.13 |
| HGNC:14651 | PPIH | peptidylprolyl isomerase H | 4.11 |
| HGNC:16462 | STRBP | spermatid perinuclear RNA binding protein | 4.08 |
| HGNC:17717 | STK39 | serine/threonine kinase 39 | 4.05 |
| HGNC:25585 | OGFOD1 | 2-oxoglutarate and iron dependent oxygenase domain containing 1 | 4.04 |
| HGNC:7784 | NFIA | nuclear factor I A | 4.02 |
| HGNC:20340 | PRICKLE2 | prickle planar cell polarity protein 2 | 4 |
| HGNC:9024 | PKP2 | plakophilin 2 | 3.99 |
| HGNC:21923 | STEAP4 | STEAP4 metalloreductase | 3.94 |
| HGNC:4171 | GATA2 | GATA binding protein 2 | 3.93 |
| HGNC:21150 | RNF125 | ring finger protein 125 | 3.89 |
| HGNC:6846 | MAP2K6 | mitogen-activated protein kinase kinase 6 | 3.85 |
| HGNC:411 | ALDH3B2 | aldehyde dehydrogenase 3 family member B2 | 3.85 |
| HGNC:19300 | STX19 | syntaxin 19 | 3.83 |
| HGNC:4881 | HEY2 | hes related family bHLH transcription factor with YRPW motif 2 | 3.83 |
| HGNC:18296 | PPP4R2 | protein phosphatase 4 regulatory subunit 2 | 3.82 |
| HGNC:5464 | IGF1 | insulin like growth factor 1 | 3.81 |
| HGNC:28990 | ZNF516 | zinc finger protein 516 | 3.8 |
| HGNC:25569 | NKAPD1 | NKAP domain containing 1 | 3.78 |
| HGNC:10524 | SALL1 | spalt like transcription factor 1 | 3.76 |
| HGNC:25764 | RMI1 | RecQ mediated genome instability 1 | 3.75 |
| HGNC:17925 | TFCP2L1 | transcription factor CP2 like 1 | 3.74 |
| HGNC:20814 | ZNF436 | zinc finger protein 436 | 3.74 |
| HGNC:30447 | PLD6 | phospholipase D family member 6 | 3.74 |
| HGNC:253 | ADH5 | alcohol dehydrogenase 5 (class III), chi polypeptide | 3.72 |
| HGNC:24944 | DDIT4 | DNA damage inducible transcript 4 | 3.71 |
| HGNC:15513 | SMYD3 | SET and MYND domain containing 3 | 3.65 |
| HGNC:29652 | WDR77 | WD repeat domain 77 | 3.61 |
| HGNC:22201 | TCAF1 | TRPM8 channel associated factor 1 | 3.6 |
| HGNC:8154 | OPRK1 | opioid receptor kappa 1 | 3.59 |
| HGNC:8013 | HMGN5 | high mobility group nucleosome binding domain 5 | 3.58 |
| HGNC:18856 | CREB3L1 | cAMP responsive element binding protein 3 like 1 | 3.57 |
| HGNC:28204 | NTPCR | nucleoside-triphosphatase, cancer-related | 3.57 |
| HGNC:18122 | SOX17 | SRY-box transcription factor 17 | 3.54 |
| HGNC:20150 | RAB15 | RAB15, member RAS oncogene family | 3.52 |
| HGNC:941 | BAG5 | BAG cochaperone 5 | 3.5 |
| HGNC:7785 | NFIB | nuclear factor I B | 3.49 |
| HGNC:9844 | RAMP2 | receptor activity modifying protein 2 | 3.48 |
| HGNC:3821 | FOXO3 | forkhead box O3 | 3.46 |
| HGNC:8995 | PIP5K1B | phosphatidylinositol-4-phosphate 5-kinase type 1 beta | 3.39 |
| HGNC:33941 | SLC35E2B | solute carrier family 35 member E2B | 3.38 |
| HGNC:4908 | HIBCH | 3-hydroxyisobutyryl-CoA hydrolase | 3.36 |
| HGNC:5209 | HSD11B2 | hydroxysteroid 11-beta dehydrogenase 2 | 3.35 |
| HGNC:6813 | MAGED1 | MAGE family member D1 | 3.34 |
| HGNC:18757 | RHOBTB3 | Rho related BTB domain containing 3 | 3.32 |
| HGNC:4253 | GGTA1 | glycoprotein alpha-galactosyltransferase 1 (inactive) | 3.32 |
| HGNC:4254 | GGTA2P | glycoprotein alpha-galactosyltransferase 2, pseudogene | 3.29 |
| HGNC:19990 | ANAPC4 | anaphase promoting complex subunit 4 | 3.24 |
| HGNC:8062 | NUP153 | nucleoporin 153 | 3.23 |
| HGNC:12805 | XDH | xanthine dehydrogenase | 3.23 |
| HGNC:23696 | TIPARP | TCDD inducible poly(ADP-ribose) polymerase | 3.22 |
| HGNC:19391 | SOCS3 | suppressor of cytokine signaling 3 | 3.21 |
| HGNC:29147 | ZNF652 | zinc finger protein 652 | 3.2 |
| HGNC:29947 | TRAK1 | trafficking kinesin protein 1 | 3.18 |
| HGNC:13071 | PATZ1 | POZ/BTB and AT hook containing zinc finger 1 | 3.18 |
| HGNC:1132 | BTG3 | BTG anti-proliferation factor 3 | 3.15 |
| HGNC:30747 | COPS2 | COP9 signalosome subunit 2 | 3.13 |
| HGNC:7541 | MXRA7 | matrix remodeling associated 7 | 3.13 |
| HGNC:4403 | GNG11 | G protein subunit gamma 11 | 3.11 |
| HGNC:31412 | SWI5 | SWI5 homologous recombination repair protein | 3.11 |
| HGNC:16841 | LITAF | lipopolysaccharide induced TNF factor | 3.1 |
| HGNC:7852 | NME4 | NME/NM23 nucleoside diphosphate kinase 4 | 3.07 |
| HGNC:7391 | MSX1 | msh homeobox 1 | 3.00 |