Table 2.
Steady-state kinetic parameters of cancer-associated IDH1/2 variants for 2OG and selected 2OG derivatives
| Entry | 2OG derivative | a,bParameter | R132H IDH1 | R172K IDH2 | R140Q IDH2 |
|---|---|---|---|---|---|
| A | ![]() |
[s-1] | 0.72 ± 0.04 | 0.72 ± 0.04 | 0.49 ± 0.04 |
| [mM] | 0.85 ± 0.19 | 0.35 ± 0.04 | 5.1 ± 1.2 | ||
| / [mM-1·s-1] | 0.85 ± 0.22 | 2.1 ± 0.3 | 0.10 ± 0.03 | ||
| B | ![]() |
[s-1] | 6.9 ± 0.4 | 4.8 ± 0.2 | 5.4 ± 0.3 |
| [mM] | 3.7 ± 0.1 | 4.2 ± 0.4 | 2.0 ± 0.8 | ||
| / [mM-1·s-1] | 1.9 ± 0.1 | 1.2 ± 0.1 | 2.8 ± 1.1 | ||
| C | ![]() |
[s-1] | 8.3 ± 0.6 | 3.9 ± 0.2 | 8.6 ± 0.4 |
| [mM] | 8.5 ± 1.2 | 15 ± 1 | 5.0 ± 0.5 | ||
| / [mM-1·s-1] | 0.99 ± 0.16 | 0.26 ± 0.03 | 1.7 ± 0.2 | ||
| D | ![]() |
[s-1] | 12 ± 1 | 2.7 ± 0.2 | 8.9 ± 0.8 |
| [mM] | 13 ± 1 | 11 ± 5 | 9.4 ± 2.3 | ||
| / [mM-1·s-1] | 0.98 ± 0.06 | 0.24 ± 0.11 | 0.95 ± 0.25 | ||
| E | ![]() |
[s-1] | 9.2 ± 0.4 | 7.8 ± 1.8 | 9.7 ± 0.4 |
| [mM] | 5.7 ± 3.3 | 16 ± 5 | 3.8 ± 0.8 | ||
| / [mM-1·s-1] | 1.6 ± 1.0 | 0.50 ± 0.19 | 2.6 ± 0.6 | ||
| F | ![]() |
[s-1] | 5.7 ± 0.6 | 1.9 ± 0.2 | 7.2 ± 0.6 |
| [mM] | 7.2 ± 0.5 | 25 ± 1 | 7.5 ± 3.6 | ||
| / [mM-1·s-1] | 0.80 ± 0.10 | 0.079 ± 0.007 | 0.97 ± 0.48 | ||
| G | ![]() |
[s-1] | 5.3 ± 0.4 | 3.9 ± 0.3 | 6.0 ± 0.5 |
| [mM] | 12 ± 1 | 25 ± 5 | 38 ± 3 | ||
| / [mM-1·s-1] | 0.44 ± 0.06 | 0.16 ± 0.04 | 0.16 ± 0.02 | ||
| cH | ![]() |
[s-1] | 3.4 ± 0.3 | 3.7 ± 0.2 | 8.0 ± 0.6 |
| [mM] | 15 ± 2 | 16 ± 1 | 23 ± 7 | ||
| / [mM-1·s-1] | 0.23 ± 0.04 | 0.23 ± 0.02 | 0.35 ± 0.11 | ||
| I | ![]() |
[s-1] | 5.7 ± 0.4 | 3.0 ± 0.2 | 5.8 ± 0.6 |
| [mM] | 12 ± 5 | 16 ± 2 | 14 ± 2 | ||
| / [mM-1·s-1] | 0.47 ± 0.21 | 0.19 ± 0.03 | 0.43 ± 0.08 |
a Mean of two independent runs, each composed of technical duplicates (n = 2; mean ± SD).
b IDH1/2 variant assays monitoring NADPH turnover were performed as described in the Experimental procedures section using 0.03 μM IDH1/2 variant and 50 μM NADPH in reaction buffer (100 mM Tris, pH 8.0, 0.005%v/v tween-20, 0.1 mg/mL BSA, 0.2 mM DTT, 20 mM MgCl2, 150 mM NaCl).
c mixture of racemic diastereomers, dr (cis:trans) = 2.5:1.








