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. 2022 Nov 25;35(2):700–716. doi: 10.1093/plcell/koac334

Figure 4.

Figure 4

HID1 promotes phyB-dependent seed germination by regulating the expression of metabolic and signaling genes related to ABA and GA. A, GO term analysis of differentially expressed genes in hid1 mutants in comparison with WT following 12, 24, and 48 h DAL. “up” or “down” indicates upregulated or downregulated genes, respectively, in hid1 mutants in comparison with WT. B, Cluster analysis of hid1- and phyB-regulated genes. The scale bar shows the log2 transformation of the ratio. C–J, FPKM (fragments per kilobase per million mapped reads) values (from the RNA-seq data) of the indicated genes in WT, hid1, and phyB following 12, 24, and 48 h DAL under phyB-on conditions.