| Software, algorithm |
cRBM algorithm |
This paper and Tubiana and Monasson, 2017
|
github.com/jertubiana/PGM
|
Materials and methods - ‘Restricted Boltzmann Machines’ , ‘Compositional Restricted Boltzmann Machine’ and Algorithmic Implementation |
| Software, algorithm |
Fishualizer |
Migault et al., 2018
|
bitbucket.org/benglitz/fishualizer_public
|
|
| Software, algorithm |
Blind Sparse Deconvolution |
Tubiana et al., 2020
|
github.com/jertubiana/BSD
|
|
| Software, algorithm |
ZBrain Atlas |
Randlett et al., 2015
|
engertlab.fas.harvard.edu/Z-Brain
|
|
| Software, algorithm |
mapzebrain atlas |
Kunst et al., 2019
|
fishatlas.neuro.mpg.de
|
|
| Software, algorithm |
MATLAB (data preprocessing) |
MathWorks |
mathworks.com/products/matlab.html
|
|
| Software, algorithm |
Computational Morphometry Toolkit (CMTK) |
NITRC |
nitrc.org/projects/cmtk
|
|
| Software, algorithm |
Python |
Python Software Foundation |
python.org
|
|
| Strain, strain background (Danio rerio, nacre mutant) |
Tg(elavl3:H2B-GCaMP6f) |
Quirin et al., 2016
|
|
|
| Strain, strain background (Danio rerio, nacre mutant) |
Tg(elavl3:H2B-GCaMP6s) |
Vladimirov et al., 2014
|
|
|
