Figure 3.

The predictive ability (R²) of PGSs estimated based on SNPs below p_T when predicting BMI in 28,880 European samples using BBJ discovery samples (GWAS summary statistics)

(A) The main bars represent R² values and error bars correspond 95% confidence intervals. The values above 95% CIs are p values indicating that R² values are not different from zero.

(B) The main bars represent the difference of R² values between the corresponding p_T and the best-performing p_T and error bars indicate 95% confidence intervals. The values above 95% CIs are p values indicating the significance of the difference between the pairs of R² values.