Table 3.
Genetic diversity and differentiation of non-synonymous allelic variants in wild and farm turbot (Scophthalmus maximus) populations.
| Gene | Na | HE | FST (all) | P-value | FST (wild) | P-value | FST(farm vs wild) | P-value |
|---|---|---|---|---|---|---|---|---|
| aqp8b | 1.19 | 0.0199 | 0.0273 | 0.1223 | −0.0019 | 0.3827 | 0.1090 | 0.0281 |
| cmtm3 | 1.94 | 0.1667 | 0.0065 | 0.0583 | 0.0013 | 0.0505 | 0.0025 | 0.0561 |
| eya3 | 2 | 0.4259 | 0.1124 | 0.0124 | 0.1105 | 0.0136 | 0.1501 | 0.0239 |
| hamp | 2 | 0.3944 | 0.0306 | 0.2804 | 0.0274 | 0.2836 | 0.0327 | 0.3380 |
| hgs | 1.63 | 0.0439 | −0.0094 | 0.1538 | −0.0072 | 0.1980 | −0.0157 | 0.0859 |
| igf1rb | 1.75 | 0.1352 | 0.0467 | 0.4232 | 0.0338 | 0.4606 | 0.1057 | 0.1005 |
| fga-like | 2 | 0.4238 | 0.0690* | 0.1809 | 0.0741 | 0.1228 | 0.0943 | 0.1086 |
| arhbap42 | 1.75 | 0.0764 | 0.0065 | 0.1038 | 0.0045 | 0.1143 | 0.0175 | 0.2533 |
| hmox | 2 | 0.2272 | 0.0249 | 0.2195 | 0.0246 | 0.2735 | 0.0170 | 0.1605 |
| ciart | 2 | 0.4572 | 0.0656 | 0.2193 | 0.0539 | 0.3240 | 0.0937 | 0.1270 |
| igfbp2 | 1.19 | 0.0248 | 0.0988 | 0.0169 | −0.0019 | 0.3827 | 0.3184 | 0.0047 |
| myb | 1.69 | 0.0667 | 0.0124 | 0.1580 | 0.0157 | 0.2383 | 0.0061 | 0.1268 |
| paxbp1 | 2 | 0.3464 | −0.0061 | 0.0111 | −0.0091 | 0.0099 | 0.0177 | 0.1639 |
| slc12a3 | 2 | 0.2656 | 0.0621 | 0.2561 | 0.0623 | 0.2125 | 0.0535 | 0.3941 |
| sstr3 | 1.06 | 0.0025 | −0.0048 | 0.3020 | −0.0019 | 0.3827 | −0.0116 | 0.1674 |
| tshr | 2 | 0.4004 | 0.1399 | 0.0015 | 0.1386 | 0.0016 | 0.1376 | 0.0310 |
| vipr1b | 2 | 0.4664 | 0.0233 | 0.1831 | 0.0220 | 0.2015 | 0.0146 | 0.1326 |
| hbαD | 1.63 | 0.0715 | 0.1399 | 0.0249 | −0.0084 | 0.1423 | 0.3821 | 0.0042 |
In bold are shown outlier loci due to divergent (high FST) or stabilizing (low FST) selection with ARLEQUIN at P < 0.01 (consistent) or P < 0.05 (italics, suggestive) with respect to neutrality, and with BAYESCAN (p < 0.05, highlighted with *).